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SCNpilot_expt_1000_bf_scaffold_15853_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15853_curated_1
unknown

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3..122
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15853_curated_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(519..1277)
DNA (759bp) protein (253aa)
Two-component response transcriptional regulator (OmpR family) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEG6_AZOBR
Chemotaxis protein CheY {ECO:0000313|EMBL:KJB97279.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
two-component response transcriptional regulator (OmpR family)
SCNpilot_expt_1000_bf_scaffold_15853_curated_3
unknown

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1466..1636
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15853_curated_4
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2517..2915
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003718E69
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KAI95395.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
SCNpilot_expt_1000_bf_scaffold_15853_curated_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3164..4375
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037DD809
Putative cation efflux system protein {ECO:0000313|EMBL:EAQ35734.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_expt_1000_bf_scaffold_15853_curated_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5453..5863)
DNA (411bp) protein (137aa)
Tax=RBG_13_Deltaproteobacteria_65_10_curated
SCNpilot_expt_1000_bf_scaffold_15853_curated_7

Not on your lists

comp(5870..6082)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F2I8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE16818.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_15853_curated_8
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7018..7206
DNA (189bp) protein (63aa)
Heavy metal efflux pump, CzcA family n=4 Tax=Methylobacterium extorquens RepID=B7KNI1_METC4
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Copper/silver efflux system, membrane component {ECO:0000313|EMBL:CAX22959.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
Displaying 8 items

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