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SCNpilot_expt_1000_bf_scaffold_13215_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13215_curated_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..409
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000369692F
Uncharacterized protein {ECO:0000313|EMBL:EKS42431.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
type 12 methyltransferase
SCNpilot_expt_1000_bf_scaffold_13215_curated_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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697..1299
DNA (603bp) protein (201aa)
Glutathione S-transferase domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3I1_STAND
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:ADH89740.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_1000_bf_scaffold_13215_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1349..1666
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213Z1_RHOPB
Monooxygenase {ECO:0000313|EMBL:KIZ41724.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13215_curated_4
unknown

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3220..4563
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037761CA
Uncharacterized protein {ECO:0000313|EMBL:CPR15758.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_13215_curated_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4747..5127
DNA (381bp) protein (127aa)
Phasin n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE75_9RHIZ
Phasin {ECO:0000313|EMBL:AHB48787.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
phasin
SCNpilot_expt_1000_bf_scaffold_13215_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5142..5531)
DNA (390bp) protein (130aa)
peptidase M29, aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
Aminopeptidase T, Metallo peptidase, MEROPS family M29 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK79_NITHX
Aminopeptidase {ECO:0000313|EMBL:KFC70967.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_13215_curated_7
unknown

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comp(6588..6842)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13215_curated_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6974..7324
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISH1_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP43301.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_expt_1000_bf_scaffold_13215_curated_9
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7321..7596)
DNA (276bp) protein (92aa)
Type IV pilus assembly PilZ n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PQW2_PSEUV
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:AEV37208.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_expt_1000_bf_scaffold_13215_curated_10
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7938..8102
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003713147
Protein-disulfide isomerase-like protein {ECO:0000313|EMBL:EGO93310.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
protein-disulfide isomerase-like protein; K07396 putative protein-disulfide isomerase
Displaying 10 items

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