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SCNpilot_expt_1000_bf_scaffold_6680_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6680_curated_1
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..286
DNA (285bp) protein (95aa)
Myo-inositol 2-dehydrogenase 1 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFL1_PELHB
Myo-inositol 2-dehydrogenase 1
Myo-inositol 2-dehydrogenase 1 {ECO:0000313|EMBL:AEQ53013.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_expt_1000_bf_scaffold_6680_curated_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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847..1239
DNA (393bp) protein (131aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
UPI0003CF41E8 related cluster n=1 Tax=unknown RepID=UPI0003CF41E8
Gluconolactonase {ECO:0000313|EMBL:ESY73127.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_6680_curated_3
unknown

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1323..1628
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6680_curated_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1629..2396)
DNA (768bp) protein (256aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDP53402.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDP53402.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036ABBE1
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6680_curated_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2460..3236)
DNA (777bp) protein (259aa)
Branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCQ9_PELHB
Branched-chain amino acid ABC transporter, ATP-bi nding protein {ECO:0000313|EMBL:CDP54122.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_6680_curated_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3236..4024)
DNA (789bp) protein (263aa)
Branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR0_PELHB
Branched-chain amino acid ABC transporter, ATP-bi nding protein {ECO:0000313|EMBL:CDP54123.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_6680_curated_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4030..5178)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000307AE88
Branched-chain amino acid transport system permeas e protein LivM {ECO:0000313|EMBL:CDP54124.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
branched-chain amino acid transport system permease protein LivM
SCNpilot_expt_1000_bf_scaffold_6680_curated_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5182..5574)
DNA (393bp) protein (131aa)
Putative ABC transporter subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR2_PELHB
Possible ABC transporter subunit {ECO:0000313|EMBL:CDP54125.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative ABC transporter subunit
SCNpilot_expt_1000_bf_scaffold_6680_curated_9
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6283..7635)
DNA (1353bp) protein (451aa)
Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR3_PELHB
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL25954.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
branched-chain amino acid ABC transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_6680_curated_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7815..8546
DNA (732bp) protein (244aa)
Transcriptional regulator, XRE family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB13119.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
XRE family transcriptional regulator
Displaying 10 items

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