name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_7404_curated_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..900
|
Electron transfer flavoprotein alpha-subunit n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQB1_GRABC
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KKB86007.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
988..2151
|
N-acetyl-L,L-diaminopimelate deacetylase; K01451 hippurate hydrolase [EC:3.5.1.32]
N-acetyl-L,L-diaminopimelate deacetylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA9_PELHB
Catalyzes the cleavage of p-aminobenzoyl-glutamat e to p-aminobenzoate and glutamate, subunit A {ECO:0000313|EMBL:CDP52756.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2180..3238
|
Putative ammonia monooxygenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA8_PELHB
Bll1341 protein {ECO:0000313|EMBL:CDP52755.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative ammonia monooxygenase; K07120
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3256..4899)
|
maltodextrin glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20]
Maltodextrin glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA4_PELHB
Alpha-glucosidase {ECO:0000313|EMBL:KFL27731.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(5059..5814)
|
short-chain dehydrogenase n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002880770
Putative dehydrogenase {ECO:0000313|EMBL:GAD34605.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
putative short chain dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5817..6746)
|
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3AT82_9RHIZ
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKB86000.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative glycerate dehydrogenase (GyaR-like protein)
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_7
unknown
|
Not on your lists |
comp(7504..7593)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8014..8340
|
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA99_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB85999.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8482..9459
|
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA98_PELHB
A alpha-helical domain with a conserved ER moti {ECO:0000313|EMBL:KKB85998.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_10
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9459..10262
|
Protein containing transglutaminase-like domain, putative cysteine protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA97_PELHB
Transglutaminase-like domain protein {ECO:0000313|EMBL:KFC68410.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
protein containing transglutaminase-like domain cysteine protease
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_11
unknown
|
Not on your lists |
10444..10674
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_12
unknown
|
Not on your lists |
10690..10830
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_13
unknown
|
Not on your lists |
10849..10977
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11318..12808
|
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
UPI0003CEB132 related cluster n=1 Tax=unknown RepID=UPI0003CEB132
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12818..13330)
|
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ9_PELHB
Putative membrane protein {ECO:0000313|EMBL:CDP53174.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13355..14773)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
Two-component sensor histidine kinase transcriptional regulatory protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJX3_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14773..15405)
|
Transcriptional regulatory protein QseB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRS3_9RHIZ
Tricarboxylate transport transcriptional regulator TctD {ECO:0000313|EMBL:CDP49898.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
two-component response regulator protein; K02483 two-component system, OmpR family, response regulator
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15493..16554
|
Iron ABC transporter substrate-binding protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B108_RHIRD
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMS96751.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
iron ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_19
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17498..17644
|
TRAP-T family transporter periplasmic binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I7H3_9RHIZ
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB82539.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein; K07795 putative tricarboxylic transport membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_20
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17652..18167
|
Uncharacterized protein n=8 Tax=Rhizobium meliloti RepID=K0PEA4_RHIML
Tricarboxylate transport protein TctB {ECO:0000313|EMBL:KIV67553.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_21
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18164..19681
|
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QR76_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57497.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_22
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19678..19956)
|
Streptomycin 3''-kinase {ECO:0000313|EMBL:CDP53170.1}; EC=2.7.1.87 {ECO:0000313|EMBL:CDP53170.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Streptomycin phosphotransferase, streptomycin-resistance n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA90_PELHB
streptomycin phosphotransferase, streptomycin-resistance
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_23
unknown
|
Not on your lists |
20632..20793
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_24
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20817..21869)
|
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ugpC; glycerol-3-phosphate transporter ATP-binding subunit; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
sn-glycerol-3-phosphate import ATP-binding protein UgpC 3 n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=UGPC3_RHIL3
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_25
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21871..22719)
|
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF122 RepID=J3BI00_9RHIZ
Glycerol-3-phosphate transporter membrane protein {ECO:0000313|EMBL:KKB86750.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
sugar ABC transporter permease; K05815 sn-glycerol 3-phosphate transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_26
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22730..23614)
|
SN-glycerol-3-phosphate transport system permease protein UgpA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA31_PELHB
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KKB86749.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SN-glycerol-3-phosphate transport system permease protein UgpA; K05814 sn-glycerol 3-phosphate transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_7404_curated_27
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23709..25040)
|
sn-glycerol-3-phosphate ABC transporter, substrate-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6W5_POLGS
Glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31322.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ugpBc; sn-glycerol-3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
|