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SCNpilot_expt_1000_bf_scaffold_1753_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1753_curated_1
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..287)
DNA (285bp) protein (95aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
putative sensor histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIF6_9RHOB
SCNpilot_expt_1000_bf_scaffold_1753_curated_2
unknown

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442..981
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1753_curated_3
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(873..1721)
DNA (849bp) protein (283aa)
Phosphate/phosphonate ABC transporter n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWG2_9RHOB
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI26064.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
phosphate/phosphonate ABC transporter
SCNpilot_expt_1000_bf_scaffold_1753_curated_4
unknown

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1910..2611
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1753_curated_5
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2671..3354)
DNA (684bp) protein (228aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q271_9RHIZ
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:CDN52486.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
SCNpilot_expt_1000_bf_scaffold_1753_curated_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3385..4098)
DNA (714bp) protein (238aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYJ8_9RHIZ
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
phoU; phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein
SCNpilot_expt_1000_bf_scaffold_1753_curated_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4145..4960)
DNA (816bp) protein (272aa)
pstB; phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Phosphate ABC transporter, ATPase subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FD47_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1753_curated_8
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4974..6263)
DNA (1290bp) protein (430aa)
Phosphate ABC transporter, inner membrane subunit PstA2 n=1 Tax=Rhizobium sp. RepID=L0NNJ2_RHISP
Phosphate ABC transporter permease PstA {ECO:0000313|EMBL:KEC78372.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1753_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6263..7636)
DNA (1374bp) protein (458aa)
Phosphate ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I323_9RHIZ
Phosphate ABC transporter permease {ECO:0000313|EMBL:EHK52620.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphate ABC transporter permease; K02037 phosphate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1753_curated_10
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7697..8734)
DNA (1038bp) protein (346aa)
Phosphate ABC transporter, periplasmic binding protein PstS2 n=1 Tax=Rhizobium sp. RepID=L0NMB8_RHISP
Phosphate ABC transporter, periplasmic binding protein PstS2 {ECO:0000313|EMBL:CCF22049.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1753_curated_11
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8996..9853
DNA (858bp) protein (286aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
phnC; phosphonate ABC transporter nucleotide-binding protein/ATPase (EC:3.6.3.28); K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
ABC transporter, nucleotide binding/ATPase protein (Phosphonate) n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5J548_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1753_curated_12
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9939..10844
DNA (906bp) protein (302aa)
Putative phosphate/phosphonate ABC transporter,periplasmic substrate-binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QJC5_9RHIZ
Putative phosphate/phosphonate ABC transporter,periplasmic substrate-binding protein {ECO:0000313|EMBL:EKF61261.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
phoD; Phosphate uptake ABC transporter periplasmic solute-binding protein precursor
SCNpilot_expt_1000_bf_scaffold_1753_curated_13
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10939..11898
DNA (960bp) protein (320aa)
Phosphonate ABC transporter, inner membrane subunit phoE1 n=1 Tax=Rhizobium sp. RepID=L0ND03_RHISP
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KEQ07319.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1753_curated_14
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11910..13379
DNA (1470bp) protein (490aa)
PhoT2 phosphonate ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. RepID=L0NNJ1_RHISP
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KEQ04316.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
phnE; phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein
Displaying 14 items

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