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SCNpilot_expt_1000_bf_scaffold_3786_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3786_curated_1
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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56..967
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C4Y5_DICDC
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS85595.1}; Flags: Precursor;; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
SCNpilot_expt_1000_bf_scaffold_3786_curated_2
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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964..1977
DNA (1014bp) protein (338aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LV32_METRJ
oligopeptide/dipeptide ABC transporter ATPase; K15583 oligopeptide transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACB27038.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_expt_1000_bf_scaffold_3786_curated_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1993..2904
DNA (912bp) protein (304aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQE4_AZOC5
oligopeptide ABC transporter ATP-binding protein; K10823 oligopeptide transport system ATP-binding protein
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAF86770.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_expt_1000_bf_scaffold_3786_curated_4
unknown

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comp(2909..3070)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3786_curated_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3623..4870)
DNA (1248bp) protein (416aa)
amine oxidase; K00274 monoamine oxidase [EC:1.4.3.4]
Amine oxidase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPC7_METSB
Amine oxidase {ECO:0000313|EMBL:EWY39466.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_expt_1000_bf_scaffold_3786_curated_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4999..5865)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJ68_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC97280.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_3786_curated_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6152..8200
DNA (2049bp) protein (683aa)
N-methylhydantoinase A {ECO:0000313|EMBL:ESR27467.1}; EC=3.5.2.14 {ECO:0000313|EMBL:ESR27467.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
N-methylhydantoinase A n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R6A7_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3786_curated_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8197..9879
DNA (1683bp) protein (561aa)
N-methylhydantoinase B n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TP57_9RHIZ
5-oxoprolinase {ECO:0000313|EMBL:KAJ32574.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
N-methylhydantoinase B/acetone carboxylase, alpha subunit
SCNpilot_expt_1000_bf_scaffold_3786_curated_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9915..10730
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6739F
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAN78131.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Amino acid deaminase
Displaying 9 items

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