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SCNpilot_expt_1000_bf_scaffold_1284_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1284_curated_1
unknown

Not on your lists

2..106
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1284_curated_2
unknown

Not on your lists

comp(457..1368)
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1284_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1365..2516)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHQ5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66828.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_4
unknown

Not on your lists

comp(2513..2749)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1284_curated_5
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3117..3689
DNA (573bp) protein (191aa)
Resolvase domain protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LNC8_BURGS
DNA-invertase Hin {ECO:0000313|EMBL:AHK71317.1}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
Resolvase domain protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_6
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4006..5349
DNA (1344bp) protein (448aa)
Resolvase domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QV28_METTR
DNA-invertase Hin {ECO:0000313|EMBL:AHK71317.1}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
resolvase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_7
unknown

Not on your lists

5638..6042
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1284_curated_8
unknown

Not on your lists

6178..6390
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1284_curated_9
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6929..7894)
DNA (966bp) protein (322aa)
Lytic transglycosylase, catalytic n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJQ5_RHOPH
lytic transglycosylase
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:CCG08220.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7899..8246)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSD7_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62820.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_11
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8314..8859)
DNA (546bp) protein (182aa)
Type IV secretory pathway protease TraF n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2K8_SPHJU
traF; type IV secretory pathway protease TraF
Type IV secretory pathway protease TraF {ECO:0000313|EMBL:BAI96840.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_12
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..9431)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99593.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9428..9652)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9T7_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05223.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_14
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9834..10910)
DNA (1077bp) protein (359aa)
replication protein A n=1 Tax=Xanthobacteraceae RepID=UPI0003701FB4
replication protein A
Replication protein A {ECO:0000313|EMBL:ACI51385.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_15
Gluconobacter thailandicus, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10911..11180)
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=M9M7E4_GLUTH
Uncharacterized protein {ECO:0000313|EMBL:GAC88751.1}; TaxID=1291534 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter thailandicus NBRC 3255.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_16
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11299..11973)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Gluconobacter thailandicus RepID=M9MAM5_GLUTH
Uncharacterized protein {ECO:0000313|EMBL:GAO00858.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_17
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12439..13284)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJP6_RHOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG08211.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_expt_1000_bf_scaffold_1284_curated_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13937..14248)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BAG7_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KJF71768.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_19
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14888..15337)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036209ED
Uncharacterized protein {ECO:0000313|EMBL:KFI24392.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1284_curated_20
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15470..17143)
DNA (1674bp) protein (558aa)
plasmid stablization protein ParB n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A99F3
Plasmid stablization protein ParB {ECO:0000313|EMBL:KFI24393.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
Displaying 20 items

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