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SCNpilot_expt_1000_bf_scaffold_5736_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5736_curated_1
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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1..261
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037FBA94
Putative sugar efflux transporter; K03291 MFS transporter, SET family, sugar efflux transporter
Putative sugar efflux transporter {ECO:0000313|EMBL:AFD25001.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_expt_1000_bf_scaffold_5736_curated_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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328..1719
DNA (1392bp) protein (464aa)
DNA repair protein radA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ6_PELHB
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
SCNpilot_expt_1000_bf_scaffold_5736_curated_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1818..2447
DNA (630bp) protein (210aa)
Colicin V production protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL26884.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
colicin V production protein; K03558 membrane protein required for colicin V production
SCNpilot_expt_1000_bf_scaffold_5736_curated_4
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2533..4017
DNA (1485bp) protein (495aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensi
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ4_PELHB
SCNpilot_expt_1000_bf_scaffold_5736_curated_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4014..5150)
DNA (1137bp) protein (379aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFZ7_PELHB
SCNpilot_expt_1000_bf_scaffold_5736_curated_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5147..5569)
DNA (423bp) protein (141aa)
Replicative DNA helicase {ECO:0000313|EMBL:CDP52408.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDP52408.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI2_PELHB
Displaying 6 items

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