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SCNpilot_expt_1000_bf_scaffold_6561_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6561_curated_1
unknown

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comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6561_curated_2
unknown

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919..1068
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6561_curated_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1119..1976)
DNA (858bp) protein (286aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
formyltetrahydrofolate deformylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EFDDB
SCNpilot_expt_1000_bf_scaffold_6561_curated_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2121..2915)
DNA (795bp) protein (265aa)
hypothetical protein; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-]
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKD3_9RHIZ
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:KFL25438.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_expt_1000_bf_scaffold_6561_curated_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3138)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC39607.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
SCNpilot_expt_1000_bf_scaffold_6561_curated_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3154..4071)
DNA (918bp) protein (306aa)
Inosose dehydratase {ECO:0000313|EMBL:CDP53744.1}; EC=4.2.1.44 {ECO:0000313|EMBL:CDP53744.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
iolE; myo-inositol catabolism protein; K03335 inosose dehydratase [EC:4.2.1.44]
xylose isomerase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F2147
SCNpilot_expt_1000_bf_scaffold_6561_curated_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4238..5758)
DNA (1521bp) protein (507aa)
iolD; malonic semialdehyde oxidative decarboxylase; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-] rbh
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Rhizobium meliloti RepID=UPI00035C246E
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:KFL31636.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_1000_bf_scaffold_6561_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6086..6460)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136F3_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40036.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_expt_1000_bf_scaffold_6561_curated_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6637..7707)
DNA (1071bp) protein (357aa)
iolC; sugar kinase (EC:2.7.1.-)
5-dehydro-2-deoxygluconokinase n=1 Tax=Rhizobium giardinii RepID=UPI000374B313
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KKB13053.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Displaying 9 items

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