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SCNpilot_expt_1000_bf_scaffold_4276_curated

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4276_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..480)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMS8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57950.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4276_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

630..920
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369A9E3
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57951.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_3
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(922..1797)
DNA (876bp) protein (292aa)
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:EKF17776.1}; EC=6.1.1.- {ECO:0000313|EMBL:EKF17776.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glutamyl-Q tRNA(Asp) synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
Glutamyl-Q tRNA(Asp) ligase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M6J1_9RHIZ
SCNpilot_expt_1000_bf_scaffold_4276_curated_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1905..2549
DNA (645bp) protein (215aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosidase II n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMT1_9RHIZ
DNA-3-methyladenine glycosidase II {ECO:0000313|EMBL:CDX49248.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3033..3224
DNA (192bp) protein (64aa)
HNH endonuclease n=3 Tax=Mesorhizobium RepID=E8TAJ4_MESCW
restriction endonuclease
HNH endonuclease {ECO:0000313|EMBL:ADV10743.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_6
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(3246..4421)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B416E4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
SCNpilot_expt_1000_bf_scaffold_4276_curated_7
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5026..5352)
DNA (327bp) protein (109aa)
UPI0003CF2493 related cluster n=1 Tax=unknown RepID=UPI0003CF2493
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESY75410.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4276_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5321..6649)
DNA (1329bp) protein (443aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM39_9RHIZ
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK58231.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transmembrane transport protein rbh
SCNpilot_expt_1000_bf_scaffold_4276_curated_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6687..6881)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDQ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX68787.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
uncharacterized small protein containing a coiled-coil domain
SCNpilot_expt_1000_bf_scaffold_4276_curated_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6992..8014
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CU8_MESSB
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABG64777.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_11
unknown

Not on your lists

comp(8195..8374)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4276_curated_12
unknown

Not on your lists

comp(8489..8704)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4276_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8961..9851
DNA (891bp) protein (297aa)
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EHK58257.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EHK58257.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Fructose-1,6-bisphosphate aldolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM65_9RHIZ
SCNpilot_expt_1000_bf_scaffold_4276_curated_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9890..10684
DNA (795bp) protein (265aa)
G-D-S-L family lipolytic protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM64_9RHIZ
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:EHK58256.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
G-D-S-L family lipolytic protein
SCNpilot_expt_1000_bf_scaffold_4276_curated_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10602..10760)
DNA (159bp) protein (53aa)
Uncharacterized protein n=8 Tax=Rhizobium meliloti RepID=F6BUP3_SINMB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK73982.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10925..12832
DNA (1908bp) protein (636aa)
AMP-dependent synthetase and ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM62_9RHIZ
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHK58254.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA synthetase/AMP-acid ligase
SCNpilot_expt_1000_bf_scaffold_4276_curated_17
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14064..14432
DNA (369bp) protein (123aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CS1_MESSB
glyoxalase/bleomycin resistance protein/dioxygenase; K06996
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABG64804.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_18
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14445..15149
DNA (705bp) protein (235aa)
Type 11 helix-turn-helix protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C004_9RHIZ
Type 11 helix-turn-helix protein {ECO:0000313|EMBL:EIM75156.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Helix-turn-helix type 11 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4276_curated_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15168..16322)
DNA (1155bp) protein (385aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G9L6_RHIML
SCNpilot_expt_1000_bf_scaffold_4276_curated_20
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16409..18226)
DNA (1818bp) protein (606aa)
Sodium/hydrogen antiporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKL1_MOBAS
Sodium/hydrogen antiporter {ECO:0000313|EMBL:EAS50512.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
potassium/proton antiporter; K11105 cell volume regulation protein A
SCNpilot_expt_1000_bf_scaffold_4276_curated_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18467..19477)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CR5_MESSB
SCNpilot_expt_1000_bf_scaffold_4276_curated_22
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19731..21737)
DNA (2007bp) protein (669aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035CDE6F
SCNpilot_expt_1000_bf_scaffold_4276_curated_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22016..22330
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7F3_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY75392.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_24
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22339..22716
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EL98_9RHIZ
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K09888 cell division protein ZapA
SCNpilot_expt_1000_bf_scaffold_4276_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23769..24011
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N3C4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18733.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_26
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24014..24616
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MN86_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18732.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24623..24925)
DNA (303bp) protein (101aa)
plasmid maintenance protein CcdB n=1 Tax=Ruegeria conchae RepID=UPI000237B264
Putative plasmid maintenance protein, CcdB {ECO:0000313|EMBL:AHK46421.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4276_curated_28
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24925..25161)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4782E
Post-segregation antitoxin CcdA {ECO:0000313|EMBL:KIH76162.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4276_curated_29
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25210..26622)
DNA (1413bp) protein (471aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FA0_RHILO
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB50667.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_4276_curated_30
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27014..27655)
DNA (642bp) protein (214aa)
Mlr3869 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FA1_RHILO
hypothetical protein
Mlr3869 protein {ECO:0000313|EMBL:BAB50666.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Displaying items 1-30 of 51 in total

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