ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5941_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5941_curated_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..560)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQ15_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05626.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_expt_1000_bf_scaffold_5941_curated_2
bacterium YEK0313, Bacteria

Not on your lists

728..1822
DNA (1095bp) protein (365aa)
UPI0003CFD968 related cluster n=1 Tax=unknown RepID=UPI0003CFD968
Uncharacterized protein {ECO:0000313|EMBL:CEJ14957.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5941_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1847..2953)
DNA (1107bp) protein (369aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ20_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHK59276.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter; K10235 alpha-glucoside transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_5941_curated_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3002..4690)
DNA (1689bp) protein (563aa)
Putative alpha-glucosidase {ECO:0000313|EMBL:CDX15554.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CDX15554.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
alpha-glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
UPI0003CFF56A related cluster n=1 Tax=unknown RepID=UPI0003CFF56A
SCNpilot_expt_1000_bf_scaffold_5941_curated_5
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4697..5779)
DNA (1083bp) protein (361aa)
alpha-glucoside ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D00CE
ABC-type sugar transport system, permease component
Alpha-glucoside ABC transporter permease {ECO:0000313|EMBL:ESY69391.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_5941_curated_6
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5819..6832)
DNA (1014bp) protein (338aa)
alpha-glucoside ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030AD139
Alpha-glucoside ABC transporter permease {ECO:0000313|EMBL:ESX98964.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
binding-protein-dependent transport systems inner membrane component; K10233 alpha-glucoside transport system permease protein
SCNpilot_expt_1000_bf_scaffold_5941_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7043..8398)
DNA (1356bp) protein (452aa)
alpha-glucoside ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A782D
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EHK59270.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
family 1 extracellular solute-binding protein; K10232 alpha-glucoside transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_5941_curated_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8718..9755
DNA (1038bp) protein (346aa)
UPI0003CFE5D5 related cluster n=1 Tax=unknown RepID=UPI0003CFE5D5
HTH-type transcriptional regulator AglR {ECO:0000313|EMBL:CDX14866.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5941_curated_9
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9774..10181)
DNA (408bp) protein (136aa)
Endoribonuclease L-PSP n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQJ4_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIM71846.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
endoribonuclease L-PSP
SCNpilot_expt_1000_bf_scaffold_5941_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10212..10493)
DNA (282bp) protein (94aa)
ABC transporter ATP-binding protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000287EE20
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCF21709.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
livF; branched-chain amino acid transport system ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Displaying 10 items

View Taxonomy