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SCNpilot_expt_1000_bf_scaffold_6817_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6817_curated_1
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..253)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KTZ9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EED36104.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
SCNpilot_expt_1000_bf_scaffold_6817_curated_2
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1180..1941
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035FCC16
Uncharacterized protein {ECO:0000313|EMBL:KEO55679.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
TRAP dicarboxylate transporter subunit DctP
SCNpilot_expt_1000_bf_scaffold_6817_curated_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1984..2550
DNA (567bp) protein (189aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSV2_TISMK
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:AFK55840.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_1000_bf_scaffold_6817_curated_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2547..3803
DNA (1257bp) protein (419aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSV3_TISMK
TRAP dicarboxylate transporter, DctM subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AFK55841.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_1000_bf_scaffold_6817_curated_5
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4170..4883)
DNA (714bp) protein (238aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1]
UPI0003D1C80E related cluster n=1 Tax=unknown RepID=UPI0003D1C80E
Contig28, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50623.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
SCNpilot_expt_1000_bf_scaffold_6817_curated_6
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4923..5768
DNA (846bp) protein (282aa)
Aldehyde dehydrogenase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PIH7_RHOS1
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABN76143.1}; Flags: Precursor;; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_expt_1000_bf_scaffold_6817_curated_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5834..6259)
DNA (426bp) protein (142aa)
UPI0003CE60E4 related cluster n=1 Tax=unknown RepID=UPI0003CE60E4
Putative transcriptional regulator {ECO:0000313|EMBL:ETA72687.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6817_curated_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6478..7005
DNA (528bp) protein (176aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWC7_HERA2
PAS sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDX27295.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
PAS/PAC sensor hybrid histidine kinase
SCNpilot_expt_1000_bf_scaffold_6817_curated_9
unknown

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7114..7347
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6817_curated_10
unknown

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comp(7725..7892)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 10 items

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