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SCNpilot_expt_1000_bf_scaffold_10390_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10390_curated_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..625
DNA (624bp) protein (208aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
UPI0003CFD4E7 related cluster n=1 Tax=unknown RepID=UPI0003CFD4E7
vacuolar-type H(+)-translocating pyrophosphatase
SCNpilot_expt_1000_bf_scaffold_10390_curated_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(726..1235)
DNA (510bp) protein (170aa)
SmpA/OmlA domain-containing protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003744119
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11833.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
small protein A (tmRNA-binding)
SCNpilot_expt_1000_bf_scaffold_10390_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1376..1939
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSE5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56355.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10390_curated_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1936..2502
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MSB9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20252.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10390_curated_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2706..3722
DNA (1017bp) protein (339aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Phosphate acyltransferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=PLSX_MESSB rbh
SCNpilot_expt_1000_bf_scaffold_10390_curated_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3734..4705
DNA (972bp) protein (324aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
3-oxoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
UPI0003CEE7B6 related cluster n=1 Tax=unknown RepID=UPI0003CEE7B6
SCNpilot_expt_1000_bf_scaffold_10390_curated_7
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4867..5193
DNA (327bp) protein (109aa)
Integration host factor subunit alpha n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JR91_9RHIZ
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha
SCNpilot_expt_1000_bf_scaffold_10390_curated_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5301..5843
DNA (543bp) protein (181aa)
UPI0003CFB32B related cluster n=1 Tax=unknown RepID=UPI0003CFB32B
MerR family transcriptional regulator {ECO:0000313|EMBL:ESZ20912.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
MerR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_10390_curated_9
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5899..6192
DNA (294bp) protein (98aa)
Protein containing DUF1330 n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PTE7_PSEUV
hypothetical protein
Protein containing DUF1330 {ECO:0000313|EMBL:AEV36161.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_expt_1000_bf_scaffold_10390_curated_10
unknown

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comp(6247..6516)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10390_curated_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6787..8238
DNA (1452bp) protein (484aa)
Alkaline phosphatase {ECO:0000313|EMBL:CDP50830.1}; EC=3.1.3.1 {ECO:0000313|EMBL:CDP50830.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
phoA; alkaline phosphatase (EC:3.1.3.1); K01077 alkaline phosphatase [EC:3.1.3.1]
alkaline phosphatase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000363976A
SCNpilot_expt_1000_bf_scaffold_10390_curated_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8300..8644)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XSI6_PARAH
Uncharacterized protein {ECO:0000313|EMBL:EZQ15402.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10390_curated_13
unknown

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9205..9336
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 13 items

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