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SCNpilot_expt_1000_bf_scaffold_1938_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1938_curated_1
unknown

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1938_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(573..2399)
DNA (1827bp) protein (609aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTB4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56055.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative ATPase
SCNpilot_expt_1000_bf_scaffold_1938_curated_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2536..3111
DNA (576bp) protein (192aa)
Transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGU6_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EHH08476.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1938_curated_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3117..3413
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGU7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH08477.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..4335)
DNA (957bp) protein (319aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4YN86_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJC55889.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative LysR-family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1938_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4414..5142
DNA (729bp) protein (243aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N1P3_9PSED
glutathione S-transferase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_1938_curated_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5759..7126
DNA (1368bp) protein (456aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
UPI0003CFA6CD related cluster n=1 Tax=unknown RepID=UPI0003CFA6CD
SCNpilot_expt_1000_bf_scaffold_1938_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7186..7461
DNA (276bp) protein (92aa)
Transcription regulator SpoVT/AbrB family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTA9_9RHIZ
Transcription regulator SpoVT/AbrB family protein {ECO:0000313|EMBL:EHK56050.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
AbrB family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1938_curated_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7878..8447
DNA (570bp) protein (190aa)
Acetolactate synthase small subunit (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS) {ECO:0000313|EMBL:CCV14647.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CCV14647.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
ilvH; acetolactate synthase 3 regulatory subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FE79_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1938_curated_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8579..9175
DNA (597bp) protein (199aa)
UPI0003D03096 related cluster n=1 Tax=unknown RepID=UPI0003D03096
Uncharacterized protein {ECO:0000313|EMBL:CDX13001.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1938_curated_11
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9257..9751
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C1T4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM75786.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9778..10395
DNA (618bp) protein (206aa)
nthA; putative ScnC; K01721 nitrile hydratase [EC:4.2.1.84]
Nitrile hydratase subunit alpha n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTA2_9RHIZ
Nitrile hydratase subunit alpha {ECO:0000313|EMBL:EHK56043.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_1938_curated_13
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10462..11016
DNA (555bp) protein (185aa)
Nitrile hydratase, beta subunit n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL93_MESAW
nitrile hydratase, beta subunit
Nitrile hydratase, beta subunit {ECO:0000313|EMBL:AGB45876.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1938_curated_14
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11003..11347
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH46_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX35192.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_expt_1000_bf_scaffold_1938_curated_15
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11368..12336
DNA (969bp) protein (323aa)
Serine/threonine dehydratase {ECO:0000313|EMBL:ERI13758.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ERI13758.1};; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19]
serine/threonine dehydratase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000313E77E
SCNpilot_expt_1000_bf_scaffold_1938_curated_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12378..13505
DNA (1128bp) protein (376aa)
hypothetical protein; K01144 exodeoxyribonuclease V [EC:3.1.11.5]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030970DA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH08503.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_1938_curated_17
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13582..14034
DNA (453bp) protein (151aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGA5_9RHIZ
Succinate dehydrogenase cytochrome b subunit family protein {ECO:0000313|EMBL:CDN53018.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14690..15412
DNA (723bp) protein (241aa)
Putative L-sorbosone dehydrogenase (SNDH) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RWT8_9BRAD
L-sorbosone dehydrogenase {ECO:0000313|EMBL:KGM35163.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative glucose/sorbosone dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1938_curated_19
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15219..15710)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F707_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07686.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_20
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15840..16586
DNA (747bp) protein (249aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] rbh
UPI0003CF143C related cluster n=1 Tax=unknown RepID=UPI0003CF143C
SCNpilot_expt_1000_bf_scaffold_1938_curated_21
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16792..18024)
DNA (1233bp) protein (411aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
pepT; peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4]
peptidase T n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037668DF
SCNpilot_expt_1000_bf_scaffold_1938_curated_22
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18283..20202
DNA (1920bp) protein (640aa)
potassium transporter Kup n=1 Tax=Hoeflea sp. 108 RepID=UPI00037ACB80
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
potassium transporter; K03549 KUP system potassium uptake protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_23
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20306..21121)
DNA (816bp) protein (272aa)
NmrA family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NZI6_9RHIZ
NmrA family protein {ECO:0000313|EMBL:EKF43344.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
NmrA family protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21243..21653
DNA (411bp) protein (137aa)
UPI0003D04580 related cluster n=1 Tax=unknown RepID=UPI0003D04580
Transcriptional regulator {ECO:0000313|EMBL:ESZ20383.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1938_curated_25
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21771..23366
DNA (1596bp) protein (532aa)
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=Rhizobium sp. CF142 RepID=J2AUY7_9RHIZ
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:EJJ27225.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_26
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23363..24646
DNA (1284bp) protein (428aa)
FAD-dependent monooxygenase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGY0_9RHIZ
FAD-dependent monooxygenase {ECO:0000313|EMBL:EHH08510.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_1938_curated_27
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24675..25769
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C71B9
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:ESX71125.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
OmpA/MotB domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1938_curated_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25948..27027
DNA (1080bp) protein (360aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF8_9GAMM">RepID=I4WPF8_9GAMM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIM01350.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_expt_1000_bf_scaffold_1938_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27111..27749
DNA (639bp) protein (213aa)
UPI0003CE0D2A related cluster n=1 Tax=unknown RepID=UPI0003CE0D2A
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC67053.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1938_curated_30
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27787..28806
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] rbh
UPI0003CF0515 related cluster n=1 Tax=unknown RepID=UPI0003CF0515
Displaying items 1-30 of 39 in total

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