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SCNpilot_expt_1000_bf_scaffold_1527_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1527_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..275)
DNA (273bp) protein (91aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN11_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EHK57878.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_1527_curated_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(900..2417)
DNA (1518bp) protein (506aa)
Protein disaggregation chaperone n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EM00_9RHIZ
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ATPase; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
SCNpilot_expt_1000_bf_scaffold_1527_curated_3
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3744..4436)
DNA (693bp) protein (231aa)
UPI0003CF73AD related cluster n=1 Tax=unknown RepID=UPI0003CF73AD
Uncharacterized protein {ECO:0000313|EMBL:KFB08983.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1527_curated_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4747..5622)
DNA (876bp) protein (292aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium
protoporphyrinogen oxidase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
UPI0003CEF3F7 related cluster n=1 Tax=unknown RepID=UPI0003CEF3F7
SCNpilot_expt_1000_bf_scaffold_1527_curated_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5636..6715)
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RF1_MESSB rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
SCNpilot_expt_1000_bf_scaffold_1527_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6729..9002)
DNA (2274bp) protein (758aa)
PTSINtr with GAF domain, PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMZ7_9RHIZ
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EHK57909.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_1527_curated_7
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9080..10354)
DNA (1275bp) protein (425aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQ24_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1527_curated_8
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10503..11135)
DNA (633bp) protein (211aa)
Putative amino acid exporter n=1 Tax=Rhizobium sp. RepID=L0NFB4_RHISP
Putative amino acid exporter {ECO:0000313|EMBL:CCF19755.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
homoserine/homoserine lactone efflux protein rbh
SCNpilot_expt_1000_bf_scaffold_1527_curated_9
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11297..12046
DNA (750bp) protein (250aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
UPI0003CE0DCC related cluster n=1 Tax=unknown RepID=UPI0003CE0DCC
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
SCNpilot_expt_1000_bf_scaffold_1527_curated_10
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12088..12513)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000367C81E
Uncharacterized protein {ECO:0000313|EMBL:AID32653.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1527_curated_11
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12510..13364)
DNA (855bp) protein (285aa)
Beta-ureidopropionase n=2 Tax=Ochrobactrum intermedium RepID=C4WJ80_9RHIZ
Beta-ureidopropionase {ECO:0000313|EMBL:EEQ96788.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCNpilot_expt_1000_bf_scaffold_1527_curated_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13370..13651)
DNA (282bp) protein (94aa)
Glutaredoxin 3 n=1 Tax=Nitratireductor indicus C115 RepID=K2NLY5_9RHIZ
Glutaredoxin 3 {ECO:0000313|EMBL:EKF40455.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
glutaredoxin 3; K03676 glutaredoxin 3
SCNpilot_expt_1000_bf_scaffold_1527_curated_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13776..14537)
DNA (762bp) protein (254aa)
UPI0003CFC756 related cluster n=1 Tax=unknown RepID=UPI0003CFC756
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ESZ22083.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
putative amidophosphoribosyltransferase
SCNpilot_expt_1000_bf_scaffold_1527_curated_14
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14629..15216
DNA (588bp) protein (196aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFJ5_MESAW
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGB44132.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1527_curated_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15213..15542
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EA786B
Type 11 methyltransferase {ECO:0000313|EMBL:EKF17759.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1527_curated_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15800..16111)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3K6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13714.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1527_curated_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16210..16641)
DNA (432bp) protein (144aa)
mutator MutT protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Mutator MutT protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMY4_9RHIZ
NTP pyrophosphohydrolase {ECO:0000313|EMBL:KFL26162.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_expt_1000_bf_scaffold_1527_curated_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16644..17417)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMY5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57897.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1527_curated_19
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17426..17839)
DNA (414bp) protein (138aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFJ2_MESAW
glutamate N-acetyltransferase/amino-acid acetyltransferase
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
Displaying 19 items

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