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SCNpilot_expt_1000_bf_scaffold_3588_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3588_curated_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..142
DNA (141bp) protein (47aa)
UPI0003D05DCF related cluster n=1 Tax=unknown RepID=UPI0003D05DCF
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_expt_1000_bf_scaffold_3588_curated_2
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(714..878)
DNA (165bp) protein (55aa)
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
SCNpilot_expt_1000_bf_scaffold_3588_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1243..1383
DNA (141bp) protein (47aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKR8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3588_curated_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1387..1623
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000309484C
Uncharacterized protein {ECO:0000313|EMBL:EUC00576.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3588_curated_5
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1634..1879
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035D4449
Uncharacterized protein {ECO:0000313|EMBL:AJY44731.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3588_curated_6
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1898..4315
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
UPI0003CEB6EF related cluster n=1 Tax=unknown RepID=UPI0003CEB6EF
SCNpilot_expt_1000_bf_scaffold_3588_curated_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4337..5437
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L1M7_AGRSH
hypothetical protein; K07027
Putative membrane protein {ECO:0000313|EMBL:AHK01010.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
SCNpilot_expt_1000_bf_scaffold_3588_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5453..6979)
DNA (1527bp) protein (509aa)
Signal transduction histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZJ0_9RHIZ
Signal transduction histidine kinase {ECO:0000313|EMBL:EHK53858.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_3588_curated_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7246..7728
DNA (483bp) protein (161aa)
Chaperone protein DnaK n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MPM3_9RHIZ
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
Displaying 9 items

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