name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3304_curated_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1007)
|
nitrogen fixation protein fixI; K01529 [EC:3.6.1.-]
UPI0003D02E25 related cluster n=1 Tax=unknown RepID=UPI0003D02E25
Nitrogen fixation protein FixI {ECO:0000313|EMBL:EZQ15847.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1004..1471)
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000304EBA6
Cytochrome oxidase {ECO:0000313|EMBL:EZQ15846.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
fixh family protein
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1476..2171)
|
nitrogen fixation protein fixG n=1 Tax=Rhizobium loti RepID=UPI00036D7843
Nitrogen fixation protein FixG {ECO:0000313|EMBL:EXL06718.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cytochrome c oxidase accessory protein CcoG
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_4
unknown
|
Not on your lists |
2880..2969
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3264..4118)
|
cytochrome CBB3 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003719D18
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cytochrome-c oxidase subunit FixP; K00406 cytochrome c oxidase cbb3-type subunit III
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4120..4272)
|
ccoQ; cytochrome c oxidase, Cbb3-type, CcoQ subunit (EC:1.9.3.1); K00407 cytochrome c oxidase cbb3-type subunit IV
FixQ1 nitrogen fixation protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E9C9A6
Nitrogen fixation protein FixQ {ECO:0000313|EMBL:EZQ15843.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4282..5013)
|
fixO2; FixO2 cytochrome c oxidase subunit (EC:1.9.3.1)
Cytochrome c oxidase subunit FixO n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D520_9RHIZ
Peptidase S41 {ECO:0000313|EMBL:EXL06721.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5026..5256)
|
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y066_MESOW
Peptidase S41 {ECO:0000313|EMBL:EZQ15841.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_9
unknown
|
Not on your lists |
5545..5691
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5807..6634)
|
cbb3-type cytochrome C oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
rbh
Cytochrome-c oxidase FixN chain n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988R2_RHILO
Peptidase S41 {ECO:0000313|EMBL:EZQ15841.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6808..7302
|
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y065_MESOW
Uncharacterized protein {ECO:0000313|EMBL:EXL06723.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7343..8032)
|
Fnr-type transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLQ7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EZQ15839.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cAMP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_13
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8266..9003)
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037DA756
Uncharacterized protein {ECO:0000313|EMBL:AKA23580.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_14
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9069..9533)
|
L-PSP family endoribonuclease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036AC7F3
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADG83103.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_15
unknown
|
Not on your lists |
10654..10836
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_16
unknown
|
Not on your lists |
10924..11058
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_17
unknown
|
Not on your lists |
11401..11751
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_18
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11708..12877)
|
amino acid ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C1942
ABC transporter permease {ECO:0000313|EMBL:ETF01459.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
amino acid ABC transporter permease
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12946..13977)
|
amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000361EE5F
Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:EFH09324.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
family 3 extracellular solute-binding protein; K09969 general L-amino acid transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_20
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14087..15187)
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000381B0F8
NnrS
NnrS {ECO:0000313|EMBL:ABG61259.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_21
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15207..16715)
|
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABG61263.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABG61263.1};; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV6_MESSB
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16836..17390
|
Putative lipid carrier protein-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV4_MESSB
putative lipid carrier protein-like
Putative lipid carrier protein-like protein {ECO:0000313|EMBL:ABG61265.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17387..18391
|
peptidase U32; K08303 putative protease [EC:3.4.-.-]
Peptidase U32 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV3_MESSB
Peptidase U32 {ECO:0000313|EMBL:ABG61266.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_24
unknown
|
Not on your lists |
comp(18464..18733)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_25
unknown
|
Not on your lists |
19886..20122
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_26
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20581..20745
|
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QB36_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_27
unknown
|
Not on your lists |
comp(20694..20894)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_28 |
Not on your lists |
21338..23062
|
cytochrome c oxidase subunit I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase (B(O/a)3-type) chain I n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RTA5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61728.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_29 |
Not on your lists |
23085..23948
|
polyprenyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RGG0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61727.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3304_curated_30 |
Not on your lists |
23954..24763
|
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9Q727_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61726.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K07152
|