ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3385_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3385_curated_1
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361..1290)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NA44_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF17853.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_expt_1000_bf_scaffold_3385_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1501..1815)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FKE2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX23070.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3385_curated_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2468..2974)
DNA (507bp) protein (169aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
SCNpilot_expt_1000_bf_scaffold_3385_curated_4
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3809..5179)
DNA (1371bp) protein (457aa)
UPI0003CFEA04 related cluster n=1 Tax=unknown RepID=UPI0003CFEA04
Uncharacterized protein {ECO:0000313|EMBL:ESY91855.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_3385_curated_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5288..7087)
DNA (1800bp) protein (600aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KGF69506.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KGF69506.1};; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S285_9RHOB
SCNpilot_expt_1000_bf_scaffold_3385_curated_6
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7199..8701)
DNA (1503bp) protein (501aa)
AMP-dependent synthetase n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003623D1C
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFC86228.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
AMP-dependent synthetase and ligase
SCNpilot_expt_1000_bf_scaffold_3385_curated_7
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8781..9770)
DNA (990bp) protein (330aa)
isomerase n=1 Tax=Martelella mediterranea RepID=UPI00037CB207
Isomerase {ECO:0000313|EMBL:AJP56272.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
putative hydrolase
SCNpilot_expt_1000_bf_scaffold_3385_curated_8
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9813..10529)
DNA (717bp) protein (239aa)
transcriptional regulator TetR family protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD209
Regulatory protein, TetR {ECO:0000313|EMBL:EAQ11352.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
transcriptional regulator TetR family
SCNpilot_expt_1000_bf_scaffold_3385_curated_9
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10700..11791
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VK46_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ11351.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
TRAP dicarboxylate transporter subunit DctP
Displaying 9 items

View Taxonomy