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SCNpilot_expt_1000_bf_scaffold_5496_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5496_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(95..1378)
DNA (1284bp) protein (428aa)
cytosine deaminase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E0E223
CodA1 cytosine deaminase {ECO:0000313|EMBL:AHK46029.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
cytosine deaminase-like metal-dependent hydrolase
SCNpilot_expt_1000_bf_scaffold_5496_curated_2
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1593..2381
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NP40_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EDQ35652.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5496_curated_3
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2378..3805
DNA (1428bp) protein (476aa)
pyridine nucleotide-disulphide oxidoreductase dimerisation region; K00520 mercuric reductase [EC:1.16.1.1]
Pyridine nucleotide-disulfide oxidoreductase dimerization subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIY7_9RHIZ
Pyridine nucleotide-disulfide oxidoreductase dimerization subunit {ECO:0000313|EMBL:EKF20640.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_expt_1000_bf_scaffold_5496_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3981..5450
DNA (1470bp) protein (490aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJG9_9RHIZ
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_5496_curated_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5557..7236)
DNA (1680bp) protein (560aa)
Resolvase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BQ3_MESSB
resolvase-like protein
Resolvase-like protein {ECO:0000313|EMBL:ABG65172.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_1000_bf_scaffold_5496_curated_6
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7233..7658)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q168Y2_ROSDO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG31461.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter; sp. (strain OCh 114)) (Roseobacter denitrificans).;"
SCNpilot_expt_1000_bf_scaffold_5496_curated_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7663..8367)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBW1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65504.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5496_curated_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8494..9039)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBW0_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65503.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5496_curated_9
unknown

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9102..9356
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI00023796BD
SCNpilot_expt_1000_bf_scaffold_5496_curated_10
unknown

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comp(9350..9604)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI00023796BC
SCNpilot_expt_1000_bf_scaffold_5496_curated_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9601..10977)
DNA (1377bp) protein (459aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBV8_XANP2
Type IV secretory pathway VirD4 protein-like protein
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:ABS65501.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5496_curated_12
unknown

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comp(10974..11279)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5496_curated_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11279..12535)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBV4_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65497.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 13 items

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