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SCNpilot_expt_1000_bf_scaffold_410_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_410_curated_1
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
Restriction endonuclease n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XS6_CYTH3
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:ABG57790.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_expt_1000_bf_scaffold_410_curated_2
unknown

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286..516
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_410_curated_3
unknown

Not on your lists

1084..1257
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_410_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1371..1730
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMC4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00906.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_410_curated_5
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2027..3301
DNA (1275bp) protein (425aa)
Tat pathway signal sequence domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W698_9FLAO
Deaminase {ECO:0000313|EMBL:KFF18542.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
amidohydrolase
SCNpilot_expt_1000_bf_scaffold_410_curated_6
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3317..3985
DNA (669bp) protein (223aa)
Ankyrin n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CA58_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:GAE64850.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
ankyrin; K06867
SCNpilot_expt_1000_bf_scaffold_410_curated_7
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4055..4903
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W699_9FLAO
AraC family transcriptional regulator {ECO:0000313|EMBL:BAP32876.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_410_curated_8
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5150..5701)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X287_FLAB3
Fasciclin {ECO:0000313|EMBL:KIA89620.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_410_curated_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6230..6775
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMT5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51318.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_410_curated_10
unknown

Not on your lists

6775..6960
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_410_curated_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7108..12378
DNA (5271bp) protein (1757aa)
FG-GAP repeat protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1L5_DYAFD
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:ACT93745.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_410_curated_12
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12410..13411)
DNA (1002bp) protein (334aa)
Acyltransferase 3 n=1 Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q65MU6_BACLD
hypothetical protein
Acyltransferase {ECO:0000313|EMBL:EQM29389.1}; TaxID=1368424 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis CG-B52.;"
SCNpilot_expt_1000_bf_scaffold_410_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13544..14743)
DNA (1200bp) protein (400aa)
mannose-6-phosphate isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:ACU61496.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ACU61496.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Mannose-6-phosphate isomerase, class I n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ6_CHIPD
SCNpilot_expt_1000_bf_scaffold_410_curated_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14943..17963
DNA (3021bp) protein (1007aa)
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO42663.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Histidine kinase id=3008741 bin=GWF2_Bacteroidetes_41_31 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
histidine kinase
SCNpilot_expt_1000_bf_scaffold_410_curated_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18022..18663
DNA (642bp) protein (214aa)
Putative two-component response regulator {ECO:0000313|EMBL:GAO42664.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Response regulator id=3008735 bin=GWF2_Bacteroidetes_41_31 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
putative transcriptional regulatory protein yxjL
SCNpilot_expt_1000_bf_scaffold_410_curated_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18703..20292
DNA (1590bp) protein (530aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO42665.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_expt_1000_bf_scaffold_410_curated_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20332..21621
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037C78AB
Uncharacterized protein {ECO:0000313|EMBL:GAO43078.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_410_curated_18
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21659..22747
DNA (1089bp) protein (363aa)
Beta-lactamase n=2 Tax=Elizabethkingia anophelis RepID=H0KVV3_9FLAO
Beta-lactamase {ECO:0000313|EMBL:ELR77638.1}; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
penicillin-binding protein
SCNpilot_expt_1000_bf_scaffold_410_curated_19
unknown

Not on your lists

22758..23351
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037BBAF2
SCNpilot_expt_1000_bf_scaffold_410_curated_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23539..24006)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RNase HI; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT6_NIAKG
SCNpilot_expt_1000_bf_scaffold_410_curated_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24008..24796)
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO42976.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phenazine biosynthesis protein PhzF family protein; K06998
Putative uncharacterized protein id=1969852 bin=GWE2_Bacteroidetes_42_39 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
SCNpilot_expt_1000_bf_scaffold_410_curated_22
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24854..25597)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KKW1_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08594.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_410_curated_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25747..27375)
DNA (1629bp) protein (543aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT7_NIAKG
methylcrotonoyl-CoA carboxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_410_curated_24
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27585..28454)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EFR1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EGV42725.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_410_curated_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28516..28893)
DNA (378bp) protein (126aa)
stress responsive protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036E916D
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:ACT95001.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_410_curated_26
Bacillus sp. NRRL B-14911, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29048..29770
DNA (723bp) protein (241aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=313627 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. NRRL B-14911.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EC9DE
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_410_curated_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29888..30205)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE70_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91019.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_410_curated_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30565..32451
DNA (1887bp) protein (629aa)
DNA topoisomerase type IIA subunit B domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE73_NIAKG
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:GAO43906.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_expt_1000_bf_scaffold_410_curated_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32521..33354
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE74_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91756.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_410_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33361..35862
DNA (2502bp) protein (834aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEV97267.1}; EC=5.99.1.3 {ECO:0000313|EMBL:AEV97267.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA topoisomerase; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE76_NIAKG
Displaying items 1-30 of 82 in total

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