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SCNpilot_expt_1000_bf_scaffold_1481_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1481_curated_1
unknown

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1481_curated_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

590..922
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037917AC
ArsR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_1481_curated_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

982..1833
DNA (852bp) protein (284aa)
arsenite S-adenosylmethyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00035E7279
Arsenite S-adenosylmethyltransferase {ECO:0000313|EMBL:KIC96204.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
type 11 methyltransferase
SCNpilot_expt_1000_bf_scaffold_1481_curated_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1851..2927
DNA (1077bp) protein (359aa)
Arsenical-resistance protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVU4_HALH1
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenical-resistance protein {ECO:0000313|EMBL:AEE53519.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_1481_curated_5
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2931..3704
DNA (774bp) protein (258aa)
Ser/Thr phosphatase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W023_9FLAO
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFK35984.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
metallophosphoesterase
SCNpilot_expt_1000_bf_scaffold_1481_curated_6
unknown

Not on your lists

3725..3862
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1481_curated_7
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3826..4092
DNA (267bp) protein (89aa)
Glycine cleavage system H protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y4_9FLAO
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
gcvH; glycine cleavage system protein H; K02437 glycine cleavage system H protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_8
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4138..6135)
DNA (1998bp) protein (666aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80778.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
type IV secretory pathway VirD4 components-like protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_9
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6147..7454)
DNA (1308bp) protein (436aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP0_ZUNPS
Relaxase {ECO:0000313|EMBL:KGO80779.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
relaxase/mobilization nuclease
SCNpilot_expt_1000_bf_scaffold_1481_curated_10
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7442..7831)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031FDCB1
Mobilization protein {ECO:0000313|EMBL:KGO80780.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
mobilisation protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_11
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8073..8969)
DNA (897bp) protein (299aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase
DNA primase {ECO:0000313|EMBL:ADF53740.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_expt_1000_bf_scaffold_1481_curated_12
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9125..9415
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003735665
Uncharacterized protein {ECO:0000313|EMBL:KIA82526.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_13
unknown

Not on your lists

comp(9429..10007)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D2853
SCNpilot_expt_1000_bf_scaffold_1481_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10007..10870)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000373F21E
Uncharacterized protein {ECO:0000313|EMBL:AHF17346.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
HEPN domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10954..11400)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLG4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17345.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1481_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11594..11833
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7V3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03397.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1481_curated_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11883..12104)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036AAE55
Uncharacterized protein {ECO:0000313|EMBL:KGO80784.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12463..12876
DNA (414bp) protein (138aa)
putative transcription regulator id=3494740 bin=GWF2_Bacteroidetes_41_31 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Fe2+/Zn2+ uptake regulation protein
Tax=GWF2_Bacteroidetes_41_31_curated
SCNpilot_expt_1000_bf_scaffold_1481_curated_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13486..17862
DNA (4377bp) protein (1459aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0V7_PEDHD
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACU04884.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_expt_1000_bf_scaffold_1481_curated_20
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17849..19174
DNA (1326bp) protein (442aa)
Possible membrane-fusion protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ECH9_9SPHI
Possible membrane-fusion protein {ECO:0000313|EMBL:EDM36885.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_1000_bf_scaffold_1481_curated_21
unknown

Not on your lists

19199..19654
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1481_curated_22
unknown

Not on your lists

19693..19932
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1481_curated_23
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19925..20539
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003692BE9
Uncharacterized protein {ECO:0000313|EMBL:KIF30814.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20546..22522
DNA (1977bp) protein (659aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWQ2_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1481_curated_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22623..23000
DNA (378bp) protein (126aa)
Putative transcriptional regulator n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z805_BELBD
putative transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1481_curated_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22997..23692
DNA (696bp) protein (232aa)
Heavy metal transport/detoxification protein n=1 Tax=Galbibacter marinus RepID=K2PQQ2_9FLAO
copper chaperone
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1481_curated_27
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24077..24463
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370BE6D
Contig5, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78897.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24612..24977
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2W7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KIC89853.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1481_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25007..25447
DNA (441bp) protein (147aa)
Secretion protein HlyD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFX3_NIAKG
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AEW00572.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1481_curated_30
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

25515..25772
DNA (258bp) protein (86aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XVM6_9BACT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHO42926.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Displaying items 1-30 of 33 in total

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