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SCNpilot_expt_1000_bf_scaffold_840_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_840_curated_1
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

268..1872
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KMR0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDF79716.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_840_curated_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

2433..4553
DNA (2121bp) protein (707aa)
P-type ATPase, translocating n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTL7_SOLCM
P-type ATPase, translocating
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_840_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4801..5175)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR8_NIAKG
hypothetical protein; K06886 hemoglobin
Uncharacterized protein {ECO:0000313|EMBL:AEW01518.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_4
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5189..5608)
DNA (420bp) protein (140aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A4Q8_MELRP
Hemerythrin HHE cation binding domain protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AFN74871.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5630..6397)
DNA (768bp) protein (256aa)
Nitrous oxide reductase maturation transmembrane protein NosY n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNH0_9SPHI
nitrous-oxide metabolic protein NosY
Nitrous-oxide metabolic protein NosY {ECO:0000313|EMBL:AEW01519.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_6
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6399..7109)
DNA (711bp) protein (237aa)
copper ABC transporter ATP-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BB59F
Copper-transport ATP-binding protein NosF {ECO:0000313|EMBL:EOR93391.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter
SCNpilot_expt_1000_bf_scaffold_840_curated_7
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7106..8335)
DNA (1230bp) protein (410aa)
Nitrous oxide reductase maturation protein NosD n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPB7_9SPHI
Nitrous oxide reductase maturation protein NosD {ECO:0000313|EMBL:EOR93390.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
parallel beta-helix repeat-containing protein; K07218 nitrous oxidase accessory protein
SCNpilot_expt_1000_bf_scaffold_840_curated_8
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8332..9348)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWQ1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93389.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_840_curated_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9440..11440)
DNA (2001bp) protein (667aa)
nitrous oxide reductase apoprotein; K00376 nitrous-oxide reductase [EC:1.7.2.4]
Nitrous-oxide reductase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMR4_9FLAO
Nitrous-oxide reductase {ECO:0000313|EMBL:ESU27709.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_1000_bf_scaffold_840_curated_10
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11491..11967)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNG6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93387.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
cytochrome c class I
SCNpilot_expt_1000_bf_scaffold_840_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12179..12775
DNA (597bp) protein (199aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS5_NIAKG
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEW01525.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_12
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12935..14155
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPC3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93395.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_840_curated_13
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14185..14943
DNA (759bp) protein (253aa)
Iron-sulfur cluster repair di-iron protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4Z1_PEDSD
iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling
Tax=GWC2_Ignavibacteria_rel_36_12_curated
SCNpilot_expt_1000_bf_scaffold_840_curated_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15034..15363)
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC91072.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_840_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15627..16070
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E573F
Transposase IS200 {ECO:0000313|EMBL:AHF14507.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transposase IS200-like protein
SCNpilot_expt_1000_bf_scaffold_840_curated_16
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16378..16602
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:AHJ95346.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
Cytochrome oxidase maturation protein, cbb3-type id=1739019 bin=GWE2_Bacteroidetes_42_24 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
cytochrome oxidase maturation protein, cbb3-type
SCNpilot_expt_1000_bf_scaffold_840_curated_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16609..18738
DNA (2130bp) protein (710aa)
bifunctional cbb3-type cytochrome C oxidase subunit I/II n=1 Tax=Segetibacter koreensis RepID=UPI00037DCCD4
cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_840_curated_18
Nonlabens sediminis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18744..18935
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N730_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAK96520.1}; TaxID=319236 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens sediminis.;"
Cbb3-type cytochrome oxidase component FixQ
SCNpilot_expt_1000_bf_scaffold_840_curated_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18945..20084
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364A149
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_840_curated_20
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20151..21653
DNA (1503bp) protein (501aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRD1_HALH1
cytochrome c oxidase accessory protein CcoG
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:AEE47921.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_21
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21753..22184
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTM3_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06481.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

22202..22915
DNA (714bp) protein (238aa)
Uncharacterized protein id=3949032 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_840_curated_23
unknown

Not on your lists

22946..23338
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_840_curated_24
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23354..24010)
DNA (657bp) protein (219aa)
Methyltransferase type 11 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJS6_FLAJ1
type 11 methyltransferase
Strain DSM 12611 Contig05, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53719.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
SCNpilot_expt_1000_bf_scaffold_840_curated_25
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24164..26440)
DNA (2277bp) protein (759aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EFK35882.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EFK35882.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X1_9FLAO
SCNpilot_expt_1000_bf_scaffold_840_curated_26
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26620..26853
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036291F4
Uncharacterized protein {ECO:0000313|EMBL:EOZ97169.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_840_curated_27
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26904..27503
DNA (600bp) protein (200aa)
Regulatory protein MarR n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIP9_MURRD
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEM71794.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
SCNpilot_expt_1000_bf_scaffold_840_curated_28
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27500..28267
DNA (768bp) protein (256aa)
Alanine racemase, N-terminal domain protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EBU3_9FLAO
Alanine racemase, N-terminal domain protein {ECO:0000313|EMBL:EGV44105.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
alanine racemase; K06997
Displaying 28 items

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