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SCNpilot_expt_1000_bf_scaffold_1313_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1313_curated_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..727)
DNA (726bp) protein (242aa)
Serine/threonine exchange transporter, LAT family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP4_NIAKG
Serine/threonine protein kinase {ECO:0000313|EMBL:KIC94586.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
serine/threonine exchange transporter, LAT family
SCNpilot_expt_1000_bf_scaffold_1313_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1188..3065
DNA (1878bp) protein (626aa)
TonB-dependent receptor plug n=1 Tax=Niabella soli DSM 19437 RepID=H1NNX2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17476.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane cobalamin receptor protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3236..3970)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003722123
Iron ABC transporter {ECO:0000313|EMBL:AHF14049.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter periplasmic protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3989..4735)
DNA (747bp) protein (249aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
demethylmenaquinone methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Demethylmenaquinone methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NK14_9SPHI
SCNpilot_expt_1000_bf_scaffold_1313_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4754..5839
DNA (1086bp) protein (362aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000364CB0D
Transcriptional regulator {ECO:0000313|EMBL:AHF14051.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
regulatory protein GntR HTH
SCNpilot_expt_1000_bf_scaffold_1313_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5846..6469
DNA (624bp) protein (208aa)
Probable GTP-binding protein EngB n=1 Tax=Niabella soli DSM 19437 RepID=H1NK12_9SPHI
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
small GTP-binding protein; K03978 GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6464..7480)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003680AEF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99974.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1313_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7486..8364
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003787A07
Uncharacterized protein {ECO:0000313|EMBL:AHF17612.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8412..8684
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037EA2C0
Uncharacterized protein {ECO:0000313|EMBL:AHF17613.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8728..9528
DNA (801bp) protein (267aa)
5'-nucleotidase, lipoprotein e(P4) family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y097_9SPHI
5'-nucleotidase, lipoprotein e(P4) family {ECO:0000313|EMBL:EHQ28146.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
5'-nucleotidase
SCNpilot_expt_1000_bf_scaffold_1313_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9531..10253
DNA (723bp) protein (241aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2]
Pyridoxine 5'-phosphate synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSI5_9SPHI
SCNpilot_expt_1000_bf_scaffold_1313_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10379..10771
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036405FE
Uncharacterized protein {ECO:0000313|EMBL:AHF17597.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10836..11147)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRL4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15484.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_14
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11245..11916)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038045C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY37435.1}; Flags: Precursor;; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
SCNpilot_expt_1000_bf_scaffold_1313_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12035..12706)
DNA (672bp) protein (224aa)
OmpA/MotB domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJT0_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF14112.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OmpA/MotB domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12967..13533
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMS8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14442.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13568..14506
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A94C6
Uncharacterized protein {ECO:0000313|EMBL:KIC92537.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K07071
SCNpilot_expt_1000_bf_scaffold_1313_curated_18
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14677..15756
DNA (1080bp) protein (360aa)
gck2; Gck (EC:2.7.1.45)
2-keto-3-deoxygluconate kinase id=1832336 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_1313_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15892..17139
DNA (1248bp) protein (416aa)
Putative uncharacterized protein id=4483277 bin=GWC2_Bacteroidetes_46_850 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_expt_1000_bf_scaffold_1313_curated_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17239..18051
DNA (813bp) protein (271aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X8_PALPW
short-chain dehydrogenase/reductase sdr
Tax=CG_Paludi_01
SCNpilot_expt_1000_bf_scaffold_1313_curated_21
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18093..18368
DNA (276bp) protein (92aa)
TIGR02436 family protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8VIQ0_9BACE
TIGR02436 family protein {ECO:0000313|EMBL:EIY25227.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1313_curated_22
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18822..19076
DNA (255bp) protein (85aa)
D-mannonate epimerase {ECO:0000313|EMBL:KJF41629.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein MsalJ2_14741 id=4120379 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Displaying 22 items

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