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SCNpilot_expt_1000_bf_scaffold_1558_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1558_curated_1
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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138..689
DNA (552bp) protein (184aa)
Restriction modification system DNA specificity domain-containing protein id=2781849 bin=GWA2_Bacteroidetes_A19_40_15 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Restriction endonuclease S subunits
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_expt_1000_bf_scaffold_1558_curated_2
unknown

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686..940
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1558_curated_3
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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947..2515
DNA (1569bp) protein (523aa)
type I restriction system adenine methylase (hsdM) (EC:2.1.1.72)
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XF43_9BACT
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EMS33168.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
SCNpilot_expt_1000_bf_scaffold_1558_curated_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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2586..3437
DNA (852bp) protein (284aa)
DNA-damage-inducible protein D id=3548584 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
DNA-damage-inducible protein D family protein; K14623 DNA-damage-inducible protein D
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_expt_1000_bf_scaffold_1558_curated_5
unknown

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3434..3655
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1558_curated_6
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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3665..4900
DNA (1236bp) protein (412aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003602434
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SCNpilot_expt_1000_bf_scaffold_1558_curated_7
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4934..5338
DNA (405bp) protein (135aa)
Uncharacterized protein n=6 Tax=Crocosphaera watsonii RepID=Q4C6K7_CROWT
hypothetical protein
Tax=CG_Maritim_01
SCNpilot_expt_1000_bf_scaffold_1558_curated_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5410..6075
DNA (666bp) protein (222aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A0B6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS13213.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1558_curated_9
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6103..6798
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S992_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52442.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_1558_curated_10
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6798..6947
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S991_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:ETN94011.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1558_curated_11
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6916..7245
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S991_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:ETN94011.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1558_curated_12
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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7485..10700
DNA (3216bp) protein (1072aa)
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family id=2781544 bin=GWA2_Bacteroidetes_A19_40_15 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_expt_1000_bf_scaffold_1558_curated_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10700..11395
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YB06_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30039.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein; K07043
SCNpilot_expt_1000_bf_scaffold_1558_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11994..13115
DNA (1122bp) protein (374aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Cytosine-specific methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPT2_9SPHI
DNA-methyltransferase Dcm
SCNpilot_expt_1000_bf_scaffold_1558_curated_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13115..13621
DNA (507bp) protein (169aa)
Identified by MetaGeneAnnotator n=2 Tax=Neisseria lactamica RepID=E1P258_NEILA
Uncharacterized protein {ECO:0000313|EMBL:KJS06297.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1558_curated_16
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13633..14220
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003477F78
hypothetical protein; K06899 nucleoid-associated protein
Uncharacterized protein {ECO:0000313|EMBL:AEF82488.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
Displaying 16 items

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