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SCNpilot_expt_1000_bf_scaffold_4386_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4386_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..324
DNA (324bp) protein (108aa)
Oxidoreductase domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTC3_9SPHI
Oxidoreductase {ECO:0000313|EMBL:AHF15605.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4386_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

495..1886
DNA (1392bp) protein (464aa)
oxidoreductase n=1 Tax=Niabella aurantiaca RepID=UPI00037833CC
Oxidoreductase {ECO:0000313|EMBL:AHF15606.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4386_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1934..3250
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036D9E22
Uncharacterized protein {ECO:0000313|EMBL:AHF15607.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4386_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3761..4207
DNA (447bp) protein (149aa)
Crp/Fnr family transcription regulator n=1 Tax=Niabella aurantiaca RepID=UPI0003720478
Crp/Fnr family transcription regulator {ECO:0000313|EMBL:AHF15608.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Crp/FNR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4386_curated_5
unknown

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comp(4155..4256)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4386_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4327..5439)
DNA (1113bp) protein (371aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374D275
Glycerate kinase {ECO:0000313|EMBL:AHF16447.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_4386_curated_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(5467..5958)
DNA (492bp) protein (164aa)
DUF1801 domain-containing protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2CY45_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_4386_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5985..7205)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000376FB7C
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_4386_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7451..8053)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003812C2A
Membrane protein {ECO:0000313|EMBL:AHF16671.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4386_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8337..8981
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NSD1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18017.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4386_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8968..10323
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381971F
Uncharacterized protein {ECO:0000313|EMBL:AHF18018.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane efflux protein
SCNpilot_expt_1000_bf_scaffold_4386_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10575..11480
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DAAE2
Uncharacterized protein {ECO:0000313|EMBL:AHF18019.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RND family efflux transporter MFP subunit
Displaying 12 items

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