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SCNpilot_expt_1000_bf_scaffold_10740_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10740_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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257..700
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Niabella aurantiaca RepID=UPI000372BDFE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
SCNpilot_expt_1000_bf_scaffold_10740_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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731..1426
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW5_9SPHI
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
SCNpilot_expt_1000_bf_scaffold_10740_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1507..2043
DNA (537bp) protein (179aa)
50S ribosomal protein L10 n=1 Tax=Segetibacter koreensis RepID=UPI00037A84F5
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|RuleBase:RU003636, ECO:0000256|SAAS:SAAS00104918}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_10740_curated_4
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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2771..3811
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003673EE3
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_expt_1000_bf_scaffold_10740_curated_5
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3947..4780
DNA (834bp) protein (278aa)
xylose isomerase n=1 Tax=Niabella aurantiaca RepID=UPI000378005B
Uncharacterized protein {ECO:0000313|EMBL:EOA56233.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10740_curated_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4941..5384
DNA (444bp) protein (148aa)
Universal stress protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0W7_9FLAO
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
UspA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_10740_curated_7
unknown

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comp(5381..5536)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036D61C0
SCNpilot_expt_1000_bf_scaffold_10740_curated_8
unknown

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comp(5592..5795)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10740_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8617..9816)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003625391
Alanine dehydrogenase {ECO:0000313|EMBL:AHF15275.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alanine dehydrogenase
SCNpilot_expt_1000_bf_scaffold_10740_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10036..10707
DNA (672bp) protein (224aa)
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; K01444 N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
glycosylasparaginase n=1 Tax=Niabella aurantiaca RepID=UPI00036E00E5
Glycosylasparaginase {ECO:0000313|EMBL:AHF14232.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 10 items

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