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SCNpilot_expt_1000_bf_scaffold_2413_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2413_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..435)
DNA (435bp) protein (145aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPU7_9SPHI
Glycosyl transferase {ECO:0000313|EMBL:AHF14917.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase; K07011
SCNpilot_expt_1000_bf_scaffold_2413_curated_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

800..1369
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036059AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47839.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
SCNpilot_expt_1000_bf_scaffold_2413_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1863..2090)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031334AC
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC89843.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Helix-turn-helix protein
SCNpilot_expt_1000_bf_scaffold_2413_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2351..2932
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362B306
Redoxin domain protein {ECO:0000313|EMBL:EHQ24297.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
redoxin domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2413_curated_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2929..6159
DNA (3231bp) protein (1077aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000371EE40
Uncharacterized protein {ECO:0000313|EMBL:ERJ61158.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_2413_curated_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6170..7564
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C3627
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04555.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_2413_curated_7
unknown

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comp(7610..8044)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_8
unknown

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8237..8512
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_9
unknown

Not on your lists

comp(8507..9301)
DNA (795bp) protein (265aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9334..10005)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18110.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2413_curated_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(9995..10270)
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_2413_curated_12
unknown

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10385..10918
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_13
unknown

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10915..11043
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11398..11763)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKB6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18113.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2413_curated_15
unknown

Not on your lists

12207..12746
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037443CE
SCNpilot_expt_1000_bf_scaffold_2413_curated_16
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12856..13269
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037489BA
Uncharacterized protein {ECO:0000313|EMBL:ESU26827.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_1000_bf_scaffold_2413_curated_17
unknown

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13527..13961
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_18
unknown

Not on your lists

14079..14252
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2413_curated_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14199..15542)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00038282CD
Uncharacterized protein {ECO:0000313|EMBL:KIC89921.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2413_curated_20
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15588..17825)
DNA (2238bp) protein (746aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1P0_9SPHI
ABC transporter related protein {ECO:0000313|EMBL:EHQ24699.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
Displaying 20 items

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