ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4150_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4150_curated_1
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Porphyromonas RepID=S4NIT7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAE14527.1}; TaxID=1235809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 6292.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4150_curated_2
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(240..1571)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Porphyromonas cansulci JCM 13913 RepID=S4N7W8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEO75925.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4150_curated_3
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1568..3712)
DNA (2145bp) protein (715aa)
Metal dependent phosphohydrolase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMQ1_RUNSL
metal dependent phosphohydrolase; K07012
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEI51284.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_4150_curated_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3716..4297)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P0M8_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51283.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_4150_curated_5
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4304..4963)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NUP7_9SPHI
CRISPR-associated protein, TM1814 family {ECO:0000313|EMBL:GAD07319.1}; TaxID=1305618 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cansulci JCM 13913.;"
CRISPR-associated protein Cas6
SCNpilot_expt_1000_bf_scaffold_4150_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5618..7462)
DNA (1845bp) protein (615aa)
Protein translocase subunit SecA n=1 Tax=Niabella soli DSM 19437 RepID=H1NSU2_9SPHI
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
protein translocase subunit secA; K03070 preprotein translocase subunit SecA
SCNpilot_expt_1000_bf_scaffold_4150_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7519..8949)
DNA (1431bp) protein (477aa)
preprotein translocase subunit SecA n=1 Tax=Niabella aurantiaca RepID=UPI0003600720
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
protein translocase subunit secA; K03070 preprotein translocase subunit SecA
SCNpilot_expt_1000_bf_scaffold_4150_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9254..9556)
DNA (303bp) protein (101aa)
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family n=1 Tax=Niabella soli DSM 19437 RepID=H1NSU5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18037.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 8 items

View Taxonomy