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SCNpilot_expt_1000_bf_scaffold_1733_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1733_curated_1
unknown

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comp(3..998)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003716EC3
SCNpilot_expt_1000_bf_scaffold_1733_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1135..2505)
DNA (1371bp) protein (457aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Niabella soli DSM 19437 RepID=H1NMF9_9SPHI
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:AHF14480.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1733_curated_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2518..3297)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E1B2E
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT93127.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3302..4222)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F4EBD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT93128.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_curated_5
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5141..6502)
DNA (1362bp) protein (454aa)
xylulokinase (EC:2.7.1.17); K00854 xylulokinase [EC:2.7.1.17]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FD5BF
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_6
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(6502..7821)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein id=3994511 bin=GWF2_Planctomycetes_42_9 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_7
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7912..8730)
DNA (819bp) protein (273aa)
glucosamine/galactosamine-6-phosphate isomerase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035FF1C6
Tax=GWF2_Planctomycetes_41_51_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_8
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8864..10084)
DNA (1221bp) protein (407aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378EEE8
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_9
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10098..11498)
DNA (1401bp) protein (467aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364041F
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_10
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11587..13581)
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B79723
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(13607..14500)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037A7DB7
aldo/keto reductase
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_expt_1000_bf_scaffold_1733_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14519..15295)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036500FE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT93132.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_1733_curated_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15330..16163)
DNA (834bp) protein (278aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003745F26
Aldolase {ECO:0000313|EMBL:ETZ24583.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_expt_1000_bf_scaffold_1733_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16177..17196)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F2030
Uncharacterized protein {ECO:0000313|EMBL:AHF17188.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1733_curated_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17208..17438)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381B195
lysophospholipase L1-like esterase
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:AFD07730.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Displaying 15 items

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