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SCNpilot_expt_1000_bf_scaffold_3954_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3954_curated_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..560
DNA (558bp) protein (186aa)
Glycosyl transferase family 2 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWU1_PEDHD
family 2 glycosyl transferase; K07011
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU04235.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_3954_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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557..1729
DNA (1173bp) protein (391aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPU6_9SPHI
Glycosyl transferase {ECO:0000313|EMBL:AHF14918.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_3954_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1726..2472)
DNA (747bp) protein (249aa)
4'-phosphopantetheinyl transferase; K06133 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
4'-phosphopantetheinyl transferase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG88_9SPHI
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:EHQ27352.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_3954_curated_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2536..3351)
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWA3_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04182.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_3954_curated_5
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3558..4157)
DNA (600bp) protein (200aa)
Putative membrane protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N3R4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM59452.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3954_curated_6
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4498..5925
DNA (1428bp) protein (476aa)
2-keto-gluconate dehydrogenase subunit n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWA6_PEDHD
Contig89, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75680.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
2-keto-gluconate dehydrogenase subunit
SCNpilot_expt_1000_bf_scaffold_3954_curated_7
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5925..6338
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWA7_PEDHD
Contig89, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75679.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3954_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6375..7241)
DNA (867bp) protein (289aa)
Glycosyl transferase family 14 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVY4_DYAFD
glycosyl transferase family protein
Glycosyl transferase family 14 {ECO:0000313|EMBL:ACT91440.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_3954_curated_9
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7905..8297
DNA (393bp) protein (131aa)
Glycosyl transferase family 14 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK97_RUNSL
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78764.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
glycosyl transferase family protein
SCNpilot_expt_1000_bf_scaffold_3954_curated_10
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8294..8749
DNA (456bp) protein (152aa)
Glycosyl transferase family 14 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ56_9SPHI
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78764.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
glycosyl transferase family protein
SCNpilot_expt_1000_bf_scaffold_3954_curated_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8751..9134
DNA (384bp) protein (128aa)
WxcM-like protein n=3 Tax=Parabacteroides RepID=A7AB17_9PORP
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78765.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3954_curated_12
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9109..10200
DNA (1092bp) protein (364aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ACU04221.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ACU04221.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Glutamine--scyllo-inositol transaminase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWS7_PEDHD
SCNpilot_expt_1000_bf_scaffold_3954_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10868..11920
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJR2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17065.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3954_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12431..13204
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ55_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17062.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying 14 items

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