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SCNpilot_expt_1000_bf_scaffold_21372_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_21372_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..905
DNA (903bp) protein (301aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INW2_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK65601.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_21372_curated_2
unknown

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comp(1339..1641)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21372_curated_3
RLO_Gammaproteobacteria_52_10, Gammaproteobacteria, Proteobacteria, Bacteria

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1969..2130
DNA (162bp) protein (54aa)
putative hydrolase; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM83_9SPHN
Tax=RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated
SCNpilot_expt_1000_bf_scaffold_21372_curated_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2144..3268
DNA (1125bp) protein (375aa)
slr0619; hypothetical protein; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
Uncharacterized protein n=7 Tax=Bacteria RepID=H0P090_9SYNC
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
SCNpilot_expt_1000_bf_scaffold_21372_curated_5
unknown

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comp(3310..3537)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21372_curated_6
unknown

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3918..4046
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21372_curated_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4216..5181)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQM4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65896.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_21372_curated_8
unknown

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6142..6300
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_21372_curated_9
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6318..7199
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB84_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ61443.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_21372_curated_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7204..7419)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6XVC9_9ALTE
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 10 items

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