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SCNpilot_expt_1000_bf_scaffold_13728_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13728_curated_1
unknown

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comp(3..407)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13728_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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856..2100
DNA (1245bp) protein (415aa)
trpB; tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20]
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Tryptophan synthase beta chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRI0_9SPHN
SCNpilot_expt_1000_bf_scaffold_13728_curated_3
unknown

Not on your lists

2097..2303
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13728_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2601..3113
DNA (513bp) protein (171aa)
trpA; tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20]
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Tryptophan synthase alpha chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRH8_9SPHN
SCNpilot_expt_1000_bf_scaffold_13728_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3110..3964
DNA (855bp) protein (285aa)
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRH7_9SPHN
SCNpilot_expt_1000_bf_scaffold_13728_curated_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3937..4839)
DNA (903bp) protein (301aa)
Tax=GWF1_Sphingomonadales_63_6_curated
Displaying 6 items

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