ggKbase home page

SCNpilot_expt_1000_bf_scaffold_14259_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14259_curated_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..197)
DNA (195bp) protein (65aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V588_SPHWW
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABQ67454.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_14259_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190..1194)
DNA (1005bp) protein (335aa)
hemB; delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIT8_9SPHN
SCNpilot_expt_1000_bf_scaffold_14259_curated_3
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1240..1461)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZ45_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG49286.1}; Flags: Precursor;; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCNpilot_expt_1000_bf_scaffold_14259_curated_4
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1688..2437)
DNA (750bp) protein (250aa)
val start codon n=1 Tax=Burkholderia ubonensis RepID=UPI00016A5D77
Uncharacterized protein {ECO:0000313|EMBL:EXI65090.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14259_curated_5
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2548..2778)
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_expt_1000_bf_scaffold_14259_curated_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3609..3950
DNA (342bp) protein (114aa)
parC; DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
DNA topoisomerase 4 subunit A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIT7_9SPHN
SCNpilot_expt_1000_bf_scaffold_14259_curated_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4039..5799
DNA (1761bp) protein (587aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIT6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64766.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 7 items

View Taxonomy