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SCNpilot_expt_1000_bf_scaffold_12921_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12921_curated_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1559
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HNS4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB00965.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12921_curated_2
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1556..2068
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002DD1195
Uncharacterized protein {ECO:0000313|EMBL:ESQ85105.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family
SCNpilot_expt_1000_bf_scaffold_12921_curated_3
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2065..2643
DNA (579bp) protein (193aa)
sodium:proton antiporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5903E
Uncharacterized protein {ECO:0000313|EMBL:ESQ85105.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family
SCNpilot_expt_1000_bf_scaffold_12921_curated_4
unknown

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comp(2579..2989)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12921_curated_5
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3163..4323
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E41744
citrate transporter
Citrate transporter {ECO:0000313|EMBL:ADU12325.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_expt_1000_bf_scaffold_12921_curated_6
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4535..4801
DNA (267bp) protein (89aa)
Transposase IS3 n=2 Tax=Labrenzia RepID=U7GF28_9RHOB
Transposase IS3 {ECO:0000313|EMBL:ERP96800.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12921_curated_7

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4825..5379
DNA (555bp) protein (185aa)
Integrase n=1 Tax=uncultured bacterium RepID=C6KV55_9BACT
Integrase {ECO:0000313|EMBL:BAH89852.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative integrase
SCNpilot_expt_1000_bf_scaffold_12921_curated_8

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5407..5664
DNA (258bp) protein (86aa)
Integrase n=1 Tax=uncultured bacterium RepID=C6KV55_9BACT
Integrase {ECO:0000313|EMBL:BAH89852.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative insertion element
Displaying 8 items

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