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SCNpilot_expt_1000_bf_scaffold_12371_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12371_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..522
DNA (522bp) protein (174aa)
poly-beta-hydroxybutyrate polymerase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:BAK65296.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAK65296.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Poly-beta-hydroxybutyrate polymerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM41_9SPHN
SCNpilot_expt_1000_bf_scaffold_12371_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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695..1492
DNA (798bp) protein (266aa)
Phasin-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM42_9SPHN
phasin-family protein
Phasin-family protein {ECO:0000313|EMBL:BAK65297.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_12371_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1611..1973
DNA (363bp) protein (121aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM43_9SPHN
clpS; ATP-dependent Clp protease adapter protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_12371_curated_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1952..2776
DNA (825bp) protein (275aa)
Methyltransferase type 12 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTP3_9CHLR
Methyltransferase type 12 {ECO:0000313|EMBL:EFH83794.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
type 12 methyltransferase
SCNpilot_expt_1000_bf_scaffold_12371_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3176..5488
DNA (2313bp) protein (771aa)
ppc; phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phosphoenolpyruvate carboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM47_9SPHN
SCNpilot_expt_1000_bf_scaffold_12371_curated_6
unknown

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comp(5652..6005)
DNA (354bp) protein (118aa)

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Displaying 6 items

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