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SCNpilot_expt_1000_bf_scaffold_20174_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_20174_curated_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..507)
DNA (507bp) protein (169aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7D3_9SPHN
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AGH50858.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_expt_1000_bf_scaffold_20174_curated_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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622..1152
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8L4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50859.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_expt_1000_bf_scaffold_20174_curated_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1882..2130
DNA (249bp) protein (83aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase {ECO:0000313|EMBL:ABQ67559.1}; EC=1.11.1.5 {ECO:0000313|EMBL:ABQ67559.1};; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Cytochrome-c peroxidase n=2 Tax=Sphingomonas wittichii RepID=A5V5J3_SPHWW
SCNpilot_expt_1000_bf_scaffold_20174_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2208..2786
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68346.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_20174_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2815..3204)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL60_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65123.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_20174_curated_6
unknown

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comp(3662..3916)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_20174_curated_7
unknown

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comp(4312..4566)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_20174_curated_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5043..5333
DNA (291bp) protein (97aa)
ptpA; low molecular weight protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:BAK65127.1}; EC=3.1.3.48 {ECO:0000313|EMBL:BAK65127.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL64_9SPHN
SCNpilot_expt_1000_bf_scaffold_20174_curated_9
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5249..5947)
DNA (699bp) protein (233aa)
Sterol desaturase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0I2U0_9SPHN
Sterol desaturase {ECO:0000313|EMBL:EXS70454.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
sterol desaturase
SCNpilot_expt_1000_bf_scaffold_20174_curated_10
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6168..6614)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z447_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI97379.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
Displaying 10 items

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