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SCNpilot_expt_1000_bf_scaffold_12076_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12076_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..374)
DNA (372bp) protein (124aa)
pyrD; dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRZ0_9SPHN
SCNpilot_expt_1000_bf_scaffold_12076_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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837..2093
DNA (1257bp) protein (419aa)
Putative AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY9_9SPHN
putative AraC family transcriptional regulator
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:BAK68544.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_12076_curated_3
unknown

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comp(2302..3081)
DNA (780bp) protein (260aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12076_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3885..5360
DNA (1476bp) protein (492aa)
Iron-sulfur cluster assembly protein SufB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRY6_9SPHN
sufB; iron-sulfur cluster assembly protein SufB; K09014 Fe-S cluster assembly protein SufB
Iron-sulfur cluster assembly protein SufB {ECO:0000313|EMBL:BAK68541.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_12076_curated_5
unknown

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5357..5788
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B36C7D
SCNpilot_expt_1000_bf_scaffold_12076_curated_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5796..5933
DNA (138bp) protein (46aa)
FeS assembly ATPase SufC n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EVE5_SPHCR
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:AEG49706.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
Displaying 6 items

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