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SCNpilot_expt_1000_bf_scaffold_6232_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6232_curated_1
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..2105
DNA (2103bp) protein (701aa)
TonB-dependent receptor plug n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2C3_SPHCR
TonB-dependent receptor {ECO:0000313|EMBL:AJR23229.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_6232_curated_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2244..3620
DNA (1377bp) protein (459aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F256_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:AJR23222.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
major facilitator superfamily protein
SCNpilot_expt_1000_bf_scaffold_6232_curated_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3646..4101)
DNA (456bp) protein (152aa)
trxC; thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
Thioredoxin n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRJ6_9SPHN
Thioredoxin {ECO:0000313|EMBL:GAO55108.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_expt_1000_bf_scaffold_6232_curated_4
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4177..4836
DNA (660bp) protein (220aa)
putative peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Putative peroxiredoxin n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRJ7_9SPHN
Peroxiredoxin {ECO:0000313|EMBL:EXS70459.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
SCNpilot_expt_1000_bf_scaffold_6232_curated_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4833..5204
DNA (372bp) protein (124aa)
Transcriptional regulator, ArsR family n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT09_9SPHN
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCW18538.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6232_curated_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5066..5551)
DNA (486bp) protein (162aa)
ArsR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ68_9SPHN
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAK67238.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_6232_curated_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5548..6261)
DNA (714bp) protein (238aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X062_9SPHN
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABQ70070.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 7 items

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