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SCNpilot_expt_1000_bf_scaffold_9709_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9709_curated_1
unknown

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3..119
DNA (117bp) protein (39aa)
glutathione S-transferase n=1 Tax=Herbaspirillum lusitanum RepID=UPI00031251C6
SCNpilot_expt_1000_bf_scaffold_9709_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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396..1868
DNA (1473bp) protein (491aa)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAK67507.1}; EC=1.2.1.- {ECO:0000313|EMBL:BAK67507.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
NAD-dependent aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV5_9SPHN
NAD-dependent aldehyde dehydrogenase
SCNpilot_expt_1000_bf_scaffold_9709_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2059..2823
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ66_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67236.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_9709_curated_4
unknown

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comp(3262..3585)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9709_curated_5
unknown

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4366..5187
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9709_curated_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5400..7574)
DNA (2175bp) protein (725aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS41_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66201.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_9709_curated_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8041..8829
DNA (789bp) protein (263aa)
Putative polyphosphate kinase 2 {ECO:0000313|EMBL:BAK66185.1}; EC=2.7.4.1 {ECO:0000313|EMBL:BAK66185.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative polyphosphate kinase 2 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRW9_9SPHN
ppk2; putative polyphosphate kinase 2
SCNpilot_expt_1000_bf_scaffold_9709_curated_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8923..9555)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66187.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_9709_curated_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9552..10043)
DNA (492bp) protein (164aa)
Transcription elongation factor GreB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRX2_9SPHN
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_9709_curated_10
unknown

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comp(10045..10230)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9709_curated_11
unknown

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10359..10469
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 11 items

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