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SCNpilot_expt_1000_bf_scaffold_8281_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8281_curated_1
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..281)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000368549C
TonB-dependent receptor {ECO:0000313|EMBL:AJR23229.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_8281_curated_2
unknown

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463..594
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8281_curated_3
unknown

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975..1196
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8281_curated_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1208..1711
DNA (504bp) protein (168aa)
GreA/GreB family elongation factor n=2 Tax=Sphingomonas wittichii RepID=A5V983_SPHWW
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
GreA/GreB family elongation factor {ECO:0000313|EMBL:ABQ68849.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_8281_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1777..4179)
DNA (2403bp) protein (801aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW5_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67135.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
TonB-dependent receptor-like protein
SCNpilot_expt_1000_bf_scaffold_8281_curated_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4619..5107
DNA (489bp) protein (163aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM51_9SPHN
ABC transporter permease {ECO:0000313|EMBL:KKC27836.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
major facilitator superfamily protein
Displaying 6 items

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