ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10953_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10953_curated_1
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(366..1367)
DNA (1002bp) protein (334aa)
Fis family transcriptional regulator n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B732FA
Uncharacterized protein {ECO:0000313|EMBL:KIY13893.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10953_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1897..1998
DNA (102bp) protein (34aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA6_9SPHN
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2005..2607
DNA (603bp) protein (201aa)
Flagellar M-ring protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA5_9SPHN
fliF; flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2615..3724
DNA (1110bp) protein (370aa)
Flagellar M-ring protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA5_9SPHN
fliF; flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3717..4730
DNA (1014bp) protein (338aa)
Flagellar motor switch protein FliG n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA4_9SPHN
fliG; flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4723..5400
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA3_9SPHN
hypothetical protein; K02411 flagellar assembly protein FliH
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64966.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6075..6713
DNA (639bp) protein (213aa)
fliI; flagellum-specific ATP synthase FliI; K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
Flagellum-specific ATP synthase FliI {ECO:0000313|EMBL:BAK64965.1}; EC=3.6.3.14 {ECO:0000313|EMBL:BAK64965.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Flagellum-specific ATP synthase FliI n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA2_9SPHN
SCNpilot_expt_1000_bf_scaffold_10953_curated_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6710..7138
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64964.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_9
unknown

Not on your lists

comp(6958..7785)
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10953_curated_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8306..8578
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKA0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64963.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9013..9210
DNA (198bp) protein (66aa)
FliL family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK99_9SPHN
FliL family protein; K02415 flagellar FliL protein
FliL family protein {ECO:0000313|EMBL:BAK64962.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_10953_curated_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9248..9418
DNA (171bp) protein (57aa)
Flagellar motor switch protein FliM n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK98_9SPHN
fliM; flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:BAK64961.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 12 items

View Taxonomy