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SCNpilot_expt_1000_bf_scaffold_18364_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_18364_curated_1
unknown

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517..1770
DNA (1254bp) protein (418aa)
Flp pilus assembly protein TadD n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CGF8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_18364_curated_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1767..2234
DNA (468bp) protein (156aa)
peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Peptidase A24A, prepilin type IV n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) PF1_SPHAL">RepID=Q1GPF1_SPHAL
Peptidase A24A, prepilin type IV {ECO:0000313|EMBL:ABF54471.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_expt_1000_bf_scaffold_18364_curated_3
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2252..2902)
DNA (651bp) protein (217aa)
NagC family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A32C30
NarL-like response regulator {ECO:0000313|EMBL:KFG91065.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
NarL-like response regulator; K07685 two-component system, NarL family, nitrate/nitrite response regulator NarP
SCNpilot_expt_1000_bf_scaffold_18364_curated_4
unknown

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comp(2899..3174)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_18364_curated_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3171..3740)
DNA (570bp) protein (190aa)
Putative signal transduction histidine kinase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EW22_SPHCR
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEG48068.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCNpilot_expt_1000_bf_scaffold_18364_curated_6
unknown

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5117..5476
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying 6 items

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