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SCNpilot_expt_1000_bf_scaffold_14228_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14228_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..132
DNA (132bp) protein (44aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKN7_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67439.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_14228_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(271..426)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKR6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67468.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_14228_curated_3
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1103..1957)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JZQ1_9SPHN
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32380.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
copB; copper resistance protein CopB; K07233 copper resistance protein B
SCNpilot_expt_1000_bf_scaffold_14228_curated_4
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1954..2511)
DNA (558bp) protein (186aa)
Copper-binding protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GBJ6_9SPHN
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32381.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
CopA family copper-resistance protein
SCNpilot_expt_1000_bf_scaffold_14228_curated_5
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2508..3674)
DNA (1167bp) protein (389aa)
Copper-resistance protein CopA n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NAW8_9SPHN
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32381.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
CopA family copper-resistance protein
SCNpilot_expt_1000_bf_scaffold_14228_curated_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3741..4286)
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9K5_SPHWW
FecI sigma-24 factor {ECO:0000313|EMBL:KKC24774.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_14228_curated_7
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4331..4771)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9K6_SPHWW
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32382.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14228_curated_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4768..5040)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000375B40E
Uncharacterized protein {ECO:0000313|EMBL:KKC24776.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_expt_1000_bf_scaffold_14228_curated_9
unknown

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5160..5327
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 9 items

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