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SCNpilot_expt_1000_bf_scaffold_15287_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15287_curated_1
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..455)
DNA (453bp) protein (151aa)
carotenoid oxygenase n=1 Tax=Sphingobium xenophagum RepID=UPI00030F5B29
Uncharacterized protein {ECO:0000313|EMBL:KFL46024.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
carotenoid oxygenase
SCNpilot_expt_1000_bf_scaffold_15287_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1334..2239
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ65_9SPHN
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAK67235.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_15287_curated_3
unknown

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2373..2483
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15287_curated_4
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2561..2926
DNA (366bp) protein (122aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002896D3A
Transposase {ECO:0000313|EMBL:EJU14178.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
transposase; K07486 transposase
SCNpilot_expt_1000_bf_scaffold_15287_curated_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3186..3368
DNA (183bp) protein (61aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002896D3A
Transposase {ECO:0000313|EMBL:AKH18673.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
transposase; K07486 transposase
SCNpilot_expt_1000_bf_scaffold_15287_curated_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3722..4162)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CPE2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU74184.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15287_curated_7
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4364..4585)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CPE2_SPHYA
Transposase {ECO:0000313|EMBL:EZP79904.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15287_curated_8
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4765..4923)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CVP8_SPHYA
Transposase {ECO:0000313|EMBL:EZP79905.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
Displaying 8 items

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