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SCNpilot_expt_1000_bf_scaffold_8220_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8220_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..447)
DNA (447bp) protein (149aa)
Putative oxidoreductase n=2 Tax=Sphingomonadaceae RepID=G2IQS4_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK65946.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_8220_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(816..1637)
DNA (822bp) protein (274aa)
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQS3_9SPHN
IclR family transcriptional regulator; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator
IclR family transcriptional regulator {ECO:0000313|EMBL:BAK65945.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_8220_curated_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2051..2809)
DNA (759bp) protein (253aa)
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4C2_NOVAD
glutathione S-transferase-like protein
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABD27301.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_expt_1000_bf_scaffold_8220_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2857..3606)
DNA (750bp) protein (250aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQS2_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK65944.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_8220_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3694..4566)
DNA (873bp) protein (291aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQS1_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK65943.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_8220_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4777..6282)
DNA (1506bp) protein (502aa)
Phenylacetaldehyde dehydrogenase {ECO:0000313|EMBL:AKH42957.1}; EC=1.2.1.39 {ECO:0000313|EMBL:AKH42957.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aldehyde dehydrogenase (EC:1.2.99.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B8_NOVAD
SCNpilot_expt_1000_bf_scaffold_8220_curated_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6328..8016)
DNA (1689bp) protein (563aa)
Quino(Hemo)protein alcohol dehydrogenase, PQQ-dependent {ECO:0000313|EMBL:GAO54715.1}; EC=1.1.2.- {ECO:0000313|EMBL:GAO54715.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
alcohol dehydrogenase; K00114 alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0003730705
Displaying 7 items

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