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SCNpilot_expt_1000_bf_scaffold_17252_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_17252_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..509)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRN4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66100.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_17252_curated_2
unknown

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comp(463..1221)
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_17252_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1513..2058
DNA (546bp) protein (182aa)
Putative aromatic acid transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRP4_9SPHN
putative aromatic acid transporter
Putative aromatic acid transporter {ECO:0000313|EMBL:BAK66110.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_17252_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2075..2857
DNA (783bp) protein (261aa)
Putative LuxR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRP3_9SPHN
putative LuxR family transcriptional regulator
Putative LuxR family transcriptional regulator {ECO:0000313|EMBL:BAK66109.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_17252_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2973..3587
DNA (615bp) protein (205aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRP0_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66106.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_17252_curated_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3550..5208
DNA (1659bp) protein (553aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRP0_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66106.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_17252_curated_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5208..5582
DNA (375bp) protein (125aa)
pcaC; 4-carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:BAK66105.1}; EC=4.1.1.44 {ECO:0000313|EMBL:BAK66105.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-carboxymuconolactone decarboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRN9_9SPHN
SCNpilot_expt_1000_bf_scaffold_17252_curated_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5579..5782
DNA (204bp) protein (68aa)
membrane protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035FE6B4
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ABS64315.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 8 items

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