name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_246_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(146..1711)
|
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Apolipoprotein N-acyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INM4_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1771..2187
|
Glyoxalase-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INM5_9SPHN
glyoxalase-family protein; K06991
Glyoxalase-family protein {ECO:0000313|EMBL:BAK68004.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2195..2839)
|
DedA-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILD8_9SPHN
DedA-family protein
DedA-family protein {ECO:0000313|EMBL:BAK65201.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2894..3814)
|
4-hydroxybenzoate octaprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILD9_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3984..4745
|
rsmE; putative ribosomal RNA small subunit methyltransferase E; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INM8_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4810..6186
|
glutamate--cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate--cysteine ligase {ECO:0000313|EMBL:BAK68008.1}; EC=6.3.2.2 {ECO:0000313|EMBL:BAK68008.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutamate--cysteine ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INM9_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6183..6818)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68010.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6970..8016
|
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN2_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK68011.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8047..8376)
|
Putative ArsR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN4_9SPHN
putative ArsR family transcriptional regulator
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:BAK68013.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8426..8902
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68014.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8984..9127
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68015.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9141..10358)
|
argG; argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Argininosuccinate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN7_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10472..11707)
|
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INP0_9SPHN
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:BAK68019.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12068..13309)
|
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=6
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INQ1_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13407..13889)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INQ2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68031.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14087..15199
|
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
DNA polymerase III subunit beta n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INQ3_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15338..16678)
|
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C988
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AGH49576.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16867..19539
|
Putative signaling protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INQ4_9SPHN
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:BAK68033.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19973..20749)
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INQ9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68038.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20949..22754
|
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Elongation factor 4 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INR0_9SPHN
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_21
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23037..24527)
|
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
Catalase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ60_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_22
unknown
|
Not on your lists |
comp(24839..24955)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_246_curated_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25088..25588
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INP8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68027.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25729..27198)
|
peptidase S41 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036096BD
Peptidase S41 {ECO:0000313|EMBL:KFD28472.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
peptidase S41
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_25
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27493..28362)
|
C alpha-dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUJ9_9SPHN
ligL; C alpha-dehydrogenase
C alpha-dehydrogenase {ECO:0000313|EMBL:BAK68041.1}; Calpha-dehydrogenase {ECO:0000313|EMBL:BAH56683.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28654..29199)
|
Putative SNase-like nuclease n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUJ8_9SPHN
putative nuclease
Putative SNase-like nuclease {ECO:0000313|EMBL:BAH56682.1}; Putative nuclease {ECO:0000313|EMBL:BAK68042.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_27
unknown
|
Not on your lists |
29305..29484
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_246_curated_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29671..30234)
|
Alkyl hydroperoxide reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUJ7_9SPHN
peroxiredoxin
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:BAH56681.1}; Peroxiredoxin {ECO:0000313|EMBL:BAK68043.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30323..31390
|
DNA replication and repair protein RecF n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INR5_9SPHN
recF; DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_246_curated_30
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31600..31908)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFJ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT09513.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
hypothetical protein
|