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SCNpilot_expt_1000_bf_scaffold_11133_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11133_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..569
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000307BAC2
Uncharacterized protein {ECO:0000313|EMBL:AKH41224.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11133_curated_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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861..1925
DNA (1065bp) protein (355aa)
Protein RecA n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WBC0_9SPHN
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
recA; recombinase A; K03553 recombination protein RecA
SCNpilot_expt_1000_bf_scaffold_11133_curated_3
unknown

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comp(1929..2642)
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11133_curated_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2731..3084
DNA (354bp) protein (118aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000313|EMBL:AKH41226.1}; EC=2.1.1.197 {ECO:0000313|EMBL:AKH41226.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Methlytransferase, UbiE/COQ5 family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9K4_ERYLH
methlytransferase, UbiE/COQ5 family protein
SCNpilot_expt_1000_bf_scaffold_11133_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3159..5783
DNA (2625bp) protein (875aa)
Alanine--tRNA ligase {ECO:0000313|EMBL:AKH41227.1}; EC=6.1.1.7 {ECO:0000313|EMBL:AKH41227.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZSM0_9SPHN
SCNpilot_expt_1000_bf_scaffold_11133_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5812..6720)
DNA (909bp) protein (303aa)
Putative transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJI9_9SPHN
Putative transporter {ECO:0000313|EMBL:GAD48337.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
glutathione-regulated potassium-efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_expt_1000_bf_scaffold_11133_curated_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6804..7250)
DNA (447bp) protein (149aa)
Putative transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJI9_9SPHN
Putative transporter {ECO:0000313|EMBL:GAD48337.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
glutathione-regulated potassium-efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_expt_1000_bf_scaffold_11133_curated_8
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7346..7504)
DNA (159bp) protein (53aa)
Glutathione-regulated potassium-efflux system protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P755_9SPHN
Glutathione-regulated potassium-efflux system protein {ECO:0000313|EMBL:EDL50156.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
SCNpilot_expt_1000_bf_scaffold_11133_curated_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7584..8051)
DNA (468bp) protein (156aa)
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9K9_ERYLH
Displaying 9 items

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