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SCNpilot_expt_1000_bf_scaffold_2324_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2324_curated_1
unknown

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comp(2..364)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2324_curated_2
unknown

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comp(1159..1329)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2324_curated_3
unknown

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2362..2802
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2324_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2796..4952)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036241FC
Uncharacterized protein {ECO:0000313|EMBL:AIT05463.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Fe(3+)-pyochelin receptor 2; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_1000_bf_scaffold_2324_curated_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5074..5976
DNA (903bp) protein (301aa)
Putative transcriptional regulator n=3 Tax=Bordetella bronchiseptica RepID=K0MKG9_BORBM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:KCV63684.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2324_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6125..6940
DNA (816bp) protein (272aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJT3_9SPHN
SCNpilot_expt_1000_bf_scaffold_2324_curated_7
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6972..7748
DNA (777bp) protein (259aa)
Transcriptional regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N740_ERYLH
transcriptional regulator
Polyphosphate kinase {ECO:0000313|EMBL:KEO96419.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
SCNpilot_expt_1000_bf_scaffold_2324_curated_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7736..8596)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030AB83C
hypothetical protein; K09709 mesaconyl-C4 CoA hydratase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_expt_1000_bf_scaffold_2324_curated_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8606..8869)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EC94_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43129.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2324_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8920..10047)
DNA (1128bp) protein (376aa)
citrate synthase II; K01647 citrate synthase [EC:2.3.3.1] rbh
Citrate synthase II n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EZB8_9RHIZ
Citrate synthase {ECO:0000313|EMBL:AHG88209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_expt_1000_bf_scaffold_2324_curated_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10142..11236
DNA (1095bp) protein (365aa)
citrate synthase 2 (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] rbh
Citrate synthase CitZ n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FC3_RHILO
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_2324_curated_12
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11430..11777
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQB9_SPHAL
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_1000_bf_scaffold_2324_curated_13
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11839..12282
DNA (444bp) protein (148aa)
Outer membrane cobalamin receptor protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AF08_9SPHN
Ligand-gated channel {ECO:0000313|EMBL:KHL25630.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein
Displaying 13 items

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