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SCNpilot_expt_1000_bf_scaffold_9915_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9915_curated_1
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..569
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCC2_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHK89662.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9915_curated_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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614..1741
DNA (1128bp) protein (376aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AKH43380.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AKH43380.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
udp-n-acetylglucosamine 2-epimerase protein; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKX1_9SPHN
SCNpilot_expt_1000_bf_scaffold_9915_curated_3
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1865..2119)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_expt_1000_bf_scaffold_9915_curated_4
unknown

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comp(2123..2290)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9915_curated_5
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2990..3142
DNA (153bp) protein (51aa)
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (EC:1.1.1.-); K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-]
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECN0_9SPHN
UDP-N-acetyl-D-mannosamine dehydrogenase {ECO:0000313|EMBL:ETI65105.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCNpilot_expt_1000_bf_scaffold_9915_curated_6
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3269..3676)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IPJ2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11579.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9915_curated_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3729..4553)
DNA (825bp) protein (275aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI {ECO:0000313|EMBL:AKH43382.1}; EC=1.3.1.9 {ECO:0000313|EMBL:AKH43382.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
enoyl-ACP reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKB0_9SPHN
SCNpilot_expt_1000_bf_scaffold_9915_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4550..5563)
DNA (1014bp) protein (338aa)
Conserved hypothetical membrane protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6B7_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AKH43383.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K07058 membrane protein
SCNpilot_expt_1000_bf_scaffold_9915_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5563..5841)
DNA (279bp) protein (93aa)
Curved DNA-binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKX5_9SPHN
Curved DNA-binding protein {ECO:0000313|EMBL:GAD48982.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
molecular chaperone DnaJ
Displaying 9 items

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